|
Name : Swit_1468 (Swit_1468) Accession : YP_001261970.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 1617547 - 1619250 bp Length : 1704 bp Strand : - Note : TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K+ transporting ATPase, A subunit DNA sequence : ATGAGCCTTGCCGGCTGGGCGCTGATCCTCGTCTTCATCGCCATCCTCCTCTTGCTGGCCAAGCCGATGGGCGCGTGGAT GTTCGCGCTCTACGAAGGCCGGCGCACGCCACTCCACCGGCTCCTCGGGCCGGTGGAGACCGGCTTCTACCGCCTGTCGG GCATCGACCCGGCCGCCGAGCAGGGCTGGCGCCGCTATGCGGTCCACATGATCCTGTTCAACCTGGGCCTGCTGCTGCTG ACCTACGTCATCCTGCGCACCCAGGCCTGGTTGCCGTTCAATCCGCGCGGCCTTCCCAATGTCGCGCCCGACCTGGCGTT CAACACGGCGGTCAGCTTCACCACCAACACCAACTGGCAGAGCTATGCCGGCGAGGCGACGATGAGCCAGCTCAGCCAGA TGGTCGCGCTCACCGTCCATAATTTCACCAGCGCCGCCACCGGCATCGCGCTCGCCTTCGCGCTGTTCCGCGGCTTCGCG CGGCGCGAGGCGGGGACGATCGGCAATTTCTGGGCCGATGTCACCCGCATCACCCTCTATCTGCTGCTGCCGCTCTCGAT CCTGTTCGCGGTCTTCCTGATCGCCAACGGGGTGCCGCAGACGCTCGCCGGATCGGTCGACGCCACCACGGTCGAGGGCG CGCGCCAGTCGATCGCGCTGGGGCCGGTCGCCAGCCAGGAGGCGATCAAGCTGCTCGGCACCAACGGCGGCGGCTTCTTC AACGCCAACTCGGCGCACCCCTTCGAGAATCCGAACGCACTGACCAACCTGTTCCAGATGCTGTCGATCTTTCTGATCGC GGTCGGGCTGACCTGGACCTTCGGCAAGGCGGTCGGCAATCCGCGCCAGGGCTGGGCGATCCTCGCCGCGATGCTGGTCC TGTTCCTGATCGGCGCGAGCGTCGTCTACTGGCAGGAGGCGGCCGGCAACCCGGTGCTCCACGGCCTCGGCGTCCCCGGC GGCAACATGGAGGGCAAGGAGGTCCGCTTCGGCATCGCCGGCTCGGCGCTCTACGCCGCCGTCACCACCGCCGCCTCGTG CGGCGCGGTCAACGCGATGCACGACAGCTTCACGGCGCTGGGCGGGATGATCCCGCTGATCAACATGCAGCTCGGCGAGG TCGTCGTCGGCGGCGTCGGCGCGGGGGTCTACGGCTTCCTGCTGTTCGCGATCCTGGCGGTGTTCGTCGCCGGGCTGATG GTCGGCCGCAGCCCCGAATATGTCGGCAAGAAGATCGAGGCGCGCGAGGTGAAGCTCGCGGTGCTGGCGATCGCGGTGCT GCCGCTCGTCATCCTCGGCTTCACCGCCCTGAGCGCGGTGACGCCCGCCGGCCTCGCCGGGCCGCTCGCCAAGGGGCCGC ACGGCTTCTCGGAGATCCTCTACGCCTTCACCAGCGGCGTCGCGAACAACGGATCGGCCTTTGCCGGCCTGACCGCCGCC ACCCCCTGGTATGACGGGCTGCTCGGCGTCGCGATGTGGATCGGCCGCTTCTTCGTGATCATCCCGATGCTCGCGATCGC CGGGTCGCTCGCCGCGAAGAAATATGTCCCGGCCGGCGCCGGTTCCTTCCCCACCACGGGGCCGCTCTGGATCGGCCTGC TCGTCGGCATCGTCCTGATCGTCGGCGGCCTGACCTTCCTGCCCAGCCTCGCGCTCGGCCCGATCGCCGATCATCTCGCG ATGATCCGCGGCCAGCTCTTCTGA Protein sequence : MSLAGWALILVFIAILLLLAKPMGAWMFALYEGRRTPLHRLLGPVETGFYRLSGIDPAAEQGWRRYAVHMILFNLGLLLL TYVILRTQAWLPFNPRGLPNVAPDLAFNTAVSFTTNTNWQSYAGEATMSQLSQMVALTVHNFTSAATGIALAFALFRGFA RREAGTIGNFWADVTRITLYLLLPLSILFAVFLIANGVPQTLAGSVDATTVEGARQSIALGPVASQEAIKLLGTNGGGFF NANSAHPFENPNALTNLFQMLSIFLIAVGLTWTFGKAVGNPRQGWAILAAMLVLFLIGASVVYWQEAAGNPVLHGLGVPG GNMEGKEVRFGIAGSALYAAVTTAASCGAVNAMHDSFTALGGMIPLINMQLGEVVVGGVGAGVYGFLLFAILAVFVAGLM VGRSPEYVGKKIEAREVKLAVLAIAVLPLVILGFTALSAVTPAGLAGPLAKGPHGFSEILYAFTSGVANNGSAFAGLTAA TPWYDGLLGVAMWIGRFFVIIPMLAIAGSLAAKKYVPAGAGSFPTTGPLWIGLLVGIVLIVGGLTFLPSLALGPIADHLA MIRGQLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 1e-66 | 46 |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 1e-66 | 46 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-68 | 43 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-68 | 43 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 2e-68 | 43 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 5e-68 | 43 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-68 | 43 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-68 | 43 |
