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Name : Swit_1467 (Swit_1467) Accession : YP_001261969.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 1615499 - 1617529 bp Length : 2031 bp Strand : - Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein DNA sequence : ATGGCGCGTTCCCAATCCCTGTTCACCGCCGATCTGATGATCCCCGCGATCGGCAACGCCTTCCGCAAGCTCGACCCGCG CGCGCTGGTCCGCAACCCGGTGATGTTCACCACGGCGGTCGTCGCGACGCTGCTGACCCTGCTGCTCGCCGTCGGCGACA GCGGCCTGGGCCGGGGGTTCGAGGTGCAGCTCGTCGCCTGGTTGTGGCTGACCGTGCTGTTCGGCACCTTCGCCGAGGCG ATCGCCGAAGGGCGCGGCCGGGCGCAGGCGGAATCGCTGCGCGCCACCAAGGCCGAGCTCAAGGCGAAGCGGATGCTGGG CGTCGGCGAGACCTGGGAACTGGTCCCCGCCGGCTGGCTGGAGCCCGGCGAGATCGTGCTGGTCGAGACCGGCGACCTGA TCCCTGGCGACGGCGAGGTGATCGAGGGCGTCGCATCGGTCAACGAGGCCGCGATCACCGGCGAAAGCGCGCCGGTGATC CGCGAGGCGGGCGGCGACCGATCGGCGGTGACGGCGGGCACCCGCGTCATCTCCGACCGGATCAAGGTCCGCGTCACCGC GCAGCCGGGGCAGGGCTTCCTCGACCGGATGATCGCGCTGGTCGAGGGCGCGCAGCGCCAGAAGACCCCGAACGAGATCG CGCTGACCATCCTGCTCGTCGGGTTGACGATCATCTTCCTGATCGCGGTCGCGACCATTCCGGGGTTCGCCGCCTATGCC GGCGGATCGGTGCCGGTGGCGATGCTCGCCGCGCTGCTGATCACCCTGATCCCGACGACGATCGCGGCGCTGCTGTCGGC GATCGGCATCGCGGGGATGGACCGGCTGGTGCGCTTCAACGTCCTCGCCAAGTCGGGCCGCGCAGTCGAGGCGGCAGGCG ACATCGACACGCTGCTGCTCGACAAGACCGGCACGATCACGATCGGCGACCGCCAGGCGACCGACTTCCGCGCGATCGGC GGCACCTCGGCGGAGGCGCTGGCCGAGGCCGCGCTGATCGCCAGCCTCGCCGACGAGACCCCCGAGGGCCGCTCTATCGT CGCCTTCGCGCGGGAGCGGCATCATGTCGCGACGGCCGAGCTGCCGACCGATGCCGAGATCATCCCCTTCACCGCACAGA CCCGCCTGTCGGGGGTCCGCGCGGGGGGCAGCCTGATCCAGAAGGGCGCGGTCGATTCGATCCTGCGCGCCCATCCGGGG CTGGGCGAGACCGGCGCGGCGGCCGAGCTGCGCCGCGTCACCGACGAGATCGCCCGCGCCGGCGGCACCCCGCTGGCGGT GGCGCGCGACGGCCGGCTGCTCGGTGCGATCCACCTCAAGGACGTGGTCAAGGCCGGGGTGCGTGAGCGCTTCGCCGAGC TGCGCCGCATGGGCATCCGGACGGTGATGATCACCGGCGACAACCCGCTGACCGCCGCCTCGATCGCGGCCGAGGCCGGG GTCGACGATTTCCTCGCCCAGGCGACGCCCGAGGACAAGCTGGCGCTGATCCGGCGCGAGCAGCAGGGCGGCAAGCTGGT GGCGATGTGCGGCGACGGCACCAACGACGCGCCCGCGCTGGCGCAGGCCGATGTCGGCGTGGCGATGAACACCGGCACCC AGGCGGCGCGCGAGGCGGGCAACATGGTCGACCTCGACAGCGATCCGACCAAGCTGATCGAGATCGTCGGCCTCGGCAAG CAGCTGCTGATGACGCGCGGCAGCCTCACCACCTTCTCGGTCGCCAACGACGTCGCCAAATATTTCGCGATCATCCCGGC GATATTCGCGGTGCTCTATCCGGGGCTGGCGGTGCTCAACGTCATGGGGCTGACGACGCCGCAATCGGCGATCCTGTCGG CGATCATCTTCAACGCGCTGATCATCCCCTGCCTCGTTCCGCTGGCGCTCAAGGGCGTCCGCTACCGGCCGATCGGCGCG GGGCCGCTGCTCGCCCGCAACCTGGGGATATACGGCGTCGGCGGGCTGATCGCCCCGTTCGTCGGCATCAAGCTGATCGA CCTCGCGGTCGGCGGGCTGGGGCTGGGGTGA Protein sequence : MARSQSLFTADLMIPAIGNAFRKLDPRALVRNPVMFTTAVVATLLTLLLAVGDSGLGRGFEVQLVAWLWLTVLFGTFAEA IAEGRGRAQAESLRATKAELKAKRMLGVGETWELVPAGWLEPGEIVLVETGDLIPGDGEVIEGVASVNEAAITGESAPVI REAGGDRSAVTAGTRVISDRIKVRVTAQPGQGFLDRMIALVEGAQRQKTPNEIALTILLVGLTIIFLIAVATIPGFAAYA GGSVPVAMLAALLITLIPTTIAALLSAIGIAGMDRLVRFNVLAKSGRAVEAAGDIDTLLLDKTGTITIGDRQATDFRAIG GTSAEALAEAALIASLADETPEGRSIVAFARERHHVATAELPTDAEIIPFTAQTRLSGVRAGGSLIQKGAVDSILRAHPG LGETGAAAELRRVTDEIARAGGTPLAVARDGRLLGAIHLKDVVKAGVRERFAELRRMGIRTVMITGDNPLTAASIAAEAG VDDFLAQATPEDKLALIRREQQGGKLVAMCGDGTNDAPALAQADVGVAMNTGTQAAREAGNMVDLDSDPTKLIEIVGLGK QLLMTRGSLTTFSVANDVAKYFAIIPAIFAVLYPGLAVLNVMGLTTPQSAILSAIIFNALIIPCLVPLALKGVRYRPIGA GPLLARNLGIYGVGGLIAPFVGIKLIDLAVGGLGLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-153 | 57 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-153 | 57 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-136 | 53 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-136 | 53 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-136 | 53 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-136 | 53 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-136 | 53 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-137 | 53 |
