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Name : Swit_1202 (Swit_1202) Accession : YP_001261706.1 Strain : Sphingomonas wittichii RW1 Genome accession: NC_009511 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1361879 - 1362985 bp Length : 1107 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain DNA sequence : ATGAATTGCGTACGAAACGAGCGATCGCGCGACATTGCCAATTCCCGCCGTAACGAAGATCGGCTAGGCGTCCCATCCAT GACCATGGATCTCGACCGCATGCTCCGCTCCCGCCAGGCCCGCTGGCTGGTCACCGGAGCCGCCGGATTCATCGGTTCGC ACCTCGTCCAGACGCTGCTCGCGGCGGGGCAGTCGGTGCGCGGTCTCGACAATTTCGCGACCGGTCATCGCAGCAACCTG GAGAATGTGCGCGAGCAGGTGGGCGAGGATGCCTGGGCGCGCTTCGACTTCATCGAGGGCGACATCCGCGACCGGGCGGA CTGCGCGGCGGCGGTCGCCGGGATCGATCATGTGCTGCACCAGGCGGCGCTGGGTTCGGTGCCGCGCTCGATCGCCGATC CGCTGTCCTCGCACGACACCAATGCCACTGGCTTCGCCAACATCATCGACGCCGCCCGGCTCGCCGGCGTCGGCAGCTTC GTCTACGCTTCGTCGAGCTCGGTCTATGGCGACGAGCCCAATCTTCCCAAGGTCGAGGGCCGGATCGGCCGGGTGTTGTC GCCCTATGCGCTGACCAAGCTCCACAACGAACTGGTCGCCGAGGTCTATCGCCGCAACTACGGTTTCGGATCGGTCGGCC TGCGCTATTTCAACGTCTTCGGCCCGCGCCAGGACCCGAACGGCGCCTATGCGGCGGTGATCCCGCGCTGGACCGCGGCG ATGATCGCGGGCGAGCCCGTCCTGATCAACGGCGACGGCGAGACGAGCCGCGACTTCTGCTACGTCGCCAACGCGGTGCA GGCCAATCTGCGCGCCGCGCTGTTCGCGCCGGCCGGGGAGGCGCATCTGCTCAACGTCGCGGTCGGCGACCGGACCACCT TGTCCGAGCTGTTCGCGCTGCTCCGCGACGCGCTGCGCCGCGACGGGGTGGTCTATGACCGCCCGGCCGAGCATGGAGAT TTCCGGGTCGGCGACGTGCGCCATTCGCTGGCGGACATCGGCGCCGCGGCCGAACTGGTCGGCTATGCGCCGACCCACCG GATCGCCGAAGGATTGGACGAGGCATTGCCCTGGTATCGGCACCTCGCCAAGACGGAGGCACTTTAG Protein sequence : MNCVRNERSRDIANSRRNEDRLGVPSMTMDLDRMLRSRQARWLVTGAAGFIGSHLVQTLLAAGQSVRGLDNFATGHRSNL ENVREQVGEDAWARFDFIEGDIRDRADCAAAVAGIDHVLHQAALGSVPRSIADPLSSHDTNATGFANIIDAARLAGVGSF VYASSSSVYGDEPNLPKVEGRIGRVLSPYALTKLHNELVAEVYRRNYGFGSVGLRYFNVFGPRQDPNGAYAAVIPRWTAA MIAGEPVLINGDGETSRDFCYVANAVQANLRAALFAPAGEAHLLNVAVGDRTTLSELFALLRDALRRDGVVYDRPAEHGD FRVGDVRHSLADIGAAAELVGYAPTHRIAEGLDEALPWYRHLAKTEAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 2e-81 | 55 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 2e-81 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swit_1202 | YP_001261706.1 | NAD-dependent epimerase/dehydratase | VFG0430 | Protein | 9e-82 | 55 |
