Gene Information

Name : Swit_0996 (Swit_0996)
Accession : YP_001261501.1
Strain : Sphingomonas wittichii RW1
Genome accession: NC_009511
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : R : General function prediction only
COG ID : COG0300
EC number : -
Position : 1107907 - 1108656 bp
Length : 750 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR

DNA sequence :
ATGGCCGATCTGACGGGCGAGGTGGCGCTGGTCACCGGCGCGACGGCGGGGCTCGGGCTGCGCTTCGCCCGGACGCTGGC
GGCGGCCGGGGCGAGCGTCGCCGTCGCGGCGCGGCGCGGCGACCGGCTCGACGCGCTGGTCGCCGAGATCGAGGGGGCAG
GCGGCCGCGCGCTGGCGATTCCGGCCGACCTGACCGACGCCGCCACGCTGGAAGGGGTGGTGGACGCCGCCCAGGCGAAG
CTCGGCCTCGTCACCATCCTGGTCAACAATGCCGGCATCCCCGACGCGGAGCTCGCGACGCGGATGTCGCTGGAGCTGAT
CGACCGGGTGATCGCGCTCAACCTCCGCACCCCCTTCGTCCTGTCGCGCGAGGTGGCGAAGCGGCTGATCGCGGCGAAGC
GGCCCGGTCGCATCGTCAACATCGCCTCGATGGCGGCCTTCCACAGCGCGCGGGCGGGATCGTCGCTCTATGCGACGACC
AAGAGCGCGGTGGTGCGGATGACCGAGGCGCTGGCGGTCGAATGGGCGGCCTATCCGATCAACGTCAATGCGATCGCCCC
CGGCGCCTTCCGGTCGGAGATGATGGAGGGGATGATCGAGCGGGTCGGCGACATGTCGCAGGGCTTTCCGCGCAAGCGGC
TGGGCGACCCCGCCGACCTCGACGGCACCTTGCTGTTCCTCGCCTCGCAGGCCTCGGCGCATGTGACGGGCACCTGCATC
AAGGTCGACGACGGCCAATATCCGCGATAG

Protein sequence :
MADLTGEVALVTGATAGLGLRFARTLAAAGASVAVAARRGDRLDALVAEIEGAGGRALAIPADLTDAATLEGVVDAAQAK
LGLVTILVNNAGIPDAELATRMSLELIDRVIALNLRTPFVLSREVAKRLIAAKRPGRIVNIASMAAFHSARAGSSLYATT
KSAVVRMTEALAVEWAAYPINVNAIAPGAFRSEMMEGMIERVGDMSQGFPRKRLGDPADLDGTLLFLASQASAHVTGTCI
KVDDGQYPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 1e-14 42