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Name : Swit_4982 (Swit_4982) Accession : YP_001260366.1 Strain : Genome accession: NC_009508 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 94568 - 95839 bp Length : 1272 bp Strand : - Note : PFAM: Integrase, catalytic region DNA sequence : ATGACGCGGATCCATGACCTGCTGGTGCGAGAAGGCTTTGAGGGTTCTTACGATGCGGTGCGGCGCTATACGACGCGCTG GAAGATCGAGCGGCGCAAGGATGCTGGCGATGGCGTCACCGCCTTCATCCCGCTGATGTTCAGGCCAGGCGAGGCCTACC AGTTCGACTGGAGCCATGAGGATGTCGAGATCGCAGGAGCGCCGATGCGGGTGAAGGTCGCGCATATGCGCCTGTGCGCG TCACGTGGGGTCTATGTCCGGGCCTATCCTCGCGAGAGCCAGGAGATGCTGTTCGACGCGCATGCGCGCGGCTTTGCCTT CTTCGGCGGCGTGCCAGGGCGCGGCATCTACGATAATATGAAGACGGCTGTGACGAGCGTGTTCACCGGCAAGGAACGCG TCTTCAACCGGCGGTTCCTGATTATGACCGACCATTATATGGTCGAGCCCACGGCCTGCTCGCCTGCGGCGGGATGGGAG AAGGGTCAGGTCGAGAACCAGGTGCAGACGATCCGGGGTCGCTTCTTCCAGCCCCGGTTGCGGTTCGCCAGTCTCGAAGA GCTCAATGGCTGGCTGGAGGCCGAGTGTCGGCGCTGGGCGGAACGGCAGCCCCATCCTGAACAGGGCGAGCTGACCGTGG CGCAGGTGCTGGAGATAGAACGATCTGCGCTGCAGCCGATGCTGGGACCGTTCGACGGCTTCAATGAGAGTGAGCATGCC GTGACCGGCACCTGCCTGATCAGCTTCGACCGCAACCGCTACTCGGTGCTCTCGACGGTGGCACGACGCACGGTGCAGGT CCGCGCCTATGCCGACCGCATCGTCGTTCGCTGCGGCGAAGAGGTTGTCGCTGAACATCCTCGCTACTTTGGGCGCAACC GCACGATCTATGACCCCTGGCATTATCTGCCAGTGCTGGCCCGCAAGCCTGGCGCGCTGCGGAACGGTGCCCCCTTCCAG GACTGGGATCTGCCACCGGCGCTTGCCCGCCTGCGCCGCAAGCTGGGTAATGGCGACGATGCCGATCGCCGGTTCGTCCG TGTGTTGTCGGCCGTACTGACCGATGGCCTGGAGCCTGTCGAAGCCGCTGTGCGTGAGGCACTGGCGACAGGCACGGCAA GCGACGACCTGATCCTCAACATCCTGGCACGACGCCGGGAACCGCCGCGTCCGCTGACGATCATCACCTCCGAGGATAGC GCCTTGCGCCATCCCCCGATCGCCGACTGTGCCCGTTACGACCAGCTGAGGACCTTCGATGCAGCGGCATGA Protein sequence : MTRIHDLLVREGFEGSYDAVRRYTTRWKIERRKDAGDGVTAFIPLMFRPGEAYQFDWSHEDVEIAGAPMRVKVAHMRLCA SRGVYVRAYPRESQEMLFDAHARGFAFFGGVPGRGIYDNMKTAVTSVFTGKERVFNRRFLIMTDHYMVEPTACSPAAGWE KGQVENQVQTIRGRFFQPRLRFASLEELNGWLEAECRRWAERQPHPEQGELTVAQVLEIERSALQPMLGPFDGFNESEHA VTGTCLISFDRNRYSVLSTVARRTVQVRAYADRIVVRCGEEVVAEHPRYFGRNRTIYDPWHYLPVLARKPGALRNGAPFQ DWDLPPALARLRRKLGNGDDADRRFVRVLSAVLTDGLEPVEAAVREALATGTASDDLILNILARRREPPRPLTIITSEDS ALRHPPIADCARYDQLRTFDAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 1e-94 | 49 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 1e-78 | 48 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 9e-71 | 46 |
