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Name : Swit_4908 (Swit_4908) Accession : YP_001260296.1 Strain : Genome accession: NC_009508 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 21498 - 22349 bp Length : 852 bp Strand : - Note : PFAM: Integrase, catalytic region DNA sequence : ATGATGCCGGTGTCCGAGCGGCGGCTGTGCCGTGTGCTCGGGCAATACCGATCGACACAGCGCAAAGCGCCTCGCGGGGC AGATGACGAAGCGGCTCTCACCGAGGATATCATTGCGCTGGCGCGGCAATATGGTCGTTATGGCTATCGCCGGGTGACGG CGTTGCTGCGCGATGCGGGGTGGCATGTGAACCGCAAGCGGGTCGAGCGCATCTGGCGACGCGAGGGGCTCAAGGTGCCG CAAAGGCAGCCGAAGCGCGGGCGGCTGTGGCTGAACGACGGATCGTGCATCCGGCTTCGGCCCGAGTATCCTGGCCATGT CTGGTCCTACGACTTTGTTGAGGGGCGGACGCACGATGGGCGTAAATACCGTATCCTGTCGATCATCGACGAGGCGAGCC GGGAGTGCATGGCGTTGCCCGTGGCGCGCAAGCTTAAGAGCGACGATGTGCTGGCGGCGCTGGCCGAACTGTTCGTCACG CGCGGGCCACCAGCGCATATCAGATCCGACAATGGCCCGGAGTTTATCGCTACGGCGGTACAAGAATGGCTGGCCAAGGT CGGCGTGAAGACGCTCTGCATTGCGCCCGGATCGCCATGGGAAAATGGCTATTGTGAATCGTTCAACGGGTCGCTGCGCG ATGAACTGCTCAACGGCGAGATCTTCTACTCGCTAGCCGAGGCCCGGATCCTGATCGAAGCGTGGCGGCGACATTACAAC ACCGTCCGGCCGCATAGCTCGCTCGGGTATCGACCGCCCGCGCCGGAGGCCGTTCCATCTCCAGTGTCGCCCTCCGGTTC CGCTTCGCTCCACCTACGGCCAACACTGGAGATGGAGGCGTCAATGCACTAA Protein sequence : MMPVSERRLCRVLGQYRSTQRKAPRGADDEAALTEDIIALARQYGRYGYRRVTALLRDAGWHVNRKRVERIWRREGLKVP QRQPKRGRLWLNDGSCIRLRPEYPGHVWSYDFVEGRTHDGRKYRILSIIDEASRECMALPVARKLKSDDVLAALAELFVT RGPPAHIRSDNGPEFIATAVQEWLAKVGVKTLCIAPGSPWENGYCESFNGSLRDELLNGEIFYSLAEARILIEAWRRHYN TVRPHSSLGYRPPAPEAVPSPVSPSGSASLHLRPTLEMEASMH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 6e-36 | 42 |
