Gene Information

Name : Swit_5070 (Swit_5070)
Accession : YP_001260450.1
Strain :
Genome accession: NC_009508
Putative virulence/resistance : Unknown
Product : IstB ATP binding domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 185248 - 186111 bp
Length : 864 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase

DNA sequence : 
ATGACCAAGGCCCATAACGTCGATGCCCAGCGCCTGAGCTTCATCCTCAACGAGTTGAGGCTTCCTGCCATCAAGGTGAT
CTGGCCCGAGTTTACCGAACGTGCCGACAAGGAGGGCTGGCCCGCCACCCGACTGCTCGCTGCACTTACCGAGCATGAAA
TGGCCGAACGTGACCGGCGTAGGATCGAACGTCATCTGAGCGACGCACGATTACCACCGGGCAAAACGCTCGACAGCTTC
GCCTTCGACGCCGTGCCGATGGTCTCGCGGGCGCAGGTCACGGCCATGACCTCGGGCGACGGATGGCTGGAAAAGGGCGC
CAATCTCATCCTGTTCGGCCCGCCGGGCGGAGGAAAGAGCCACTTGGCGGCAGCCATCGGCCTGCAACTTGTCCAGAATG
GTTGGCGCGTGCTGTTCACCCGCACGTCCGAGCTGGTCCAGAAGCTTCAGCTCGCGCGCCGCGAACTGGCGCTCGAATCC
GCCATCGCCAAGCTCGACAAATACCACCTGCTCATCCTGGACGACCTCGCCTATGTCGCCAAGGATCAGGCTGAAACCTC
CGTGCTCTTCGAGTTGATCAGCGCACGCTATGAGCGCCGATCCATGCTCATCACGGCCAACCAGCCCTTCGGCGAATGGA
ACCGGGTCTTCCCGGATCCCGCCATGACGCTCGCGGCCGTCGACCGTCTCGTTCATCACGCCACCATCTTCGAGATGAAT
GTCGAGAGCTATCGTCGCAGGGCCGCCCTCCAGCGACAGACAGGGGCTGGAAGGACCCCAAAATACGCGACAATCAAATC
CATCGAGAAAATGTCGATCAGCGACAATCAGAGCGAAGAATCGCCCTTGCCAGCGACAATCTAA

Protein sequence : 
MTKAHNVDAQRLSFILNELRLPAIKVIWPEFTERADKEGWPATRLLAALTEHEMAERDRRRIERHLSDARLPPGKTLDSF
AFDAVPMVSRAQVTAMTSGDGWLEKGANLILFGPPGGGKSHLAAAIGLQLVQNGWRVLFTRTSELVQKLQLARRELALES
AIAKLDKYHLLILDDLAYVAKDQAETSVLFELISARYERRSMLITANQPFGEWNRVFPDPAMTLAAVDRLVHHATIFEMN
VESYRRRAALQRQTGAGRTPKYATIKSIEKMSISDNQSEESPLPATI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3608 NP_755483.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-47 43
c5145 NP_756993.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-47 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swit_5070 YP_001260450.1 IstB ATP binding domain-containing protein VFG1729 Protein 1e-47 43