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Name : Swit_5007 (Swit_5007) Accession : YP_001260390.1 Strain : Genome accession: NC_009508 Putative virulence/resistance : Virulence Product : type IV secretion/conjugal transfer ATPase Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 124328 - 126745 bp Length : 2418 bp Strand : - Note : TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE, TrbE, VirB component of type IV transporter system DNA sequence : ATGGCTAGCCGGGCCAACTCGTTGGGCGGCGCTGCCGCCCGGACGCCGTGGCGGATCCTCAAAAACGAGGCGGACCCCGC GCGTTATCTCCCCTATGCGCGTCACATCGACGACAATGTCATCGCGCTCGACGGGCGCGACCTCATGATGATGTTCAAGC TCGATGGCCTCGCATTCGAGACCGCCGACCCAATCCATCTCAACGACTGGCACGAAAAGCTCAACGGCACGCTGCGCAAT ATCGCCGACGACCGCCTGGCGATCTGGACCCATATCGTTCGTCGGCCAATCACGGACTATCCCGAAGGCGAGTTTCGCTC GGCCTTTGCGGCCGATCTCGATGCAAAATACCGCGCGCGGGTGACCGCCAAGCGCATGTTCGTCAACGAGCTCTACCTGA CGCTCATCATGCGTCCATCCGTAGGATCGGCCGATCGTACCGGCGAGCTGCTTCGACGTCTGGCGTCGGCACGCAAGGAG GGGACCGAAGTCGACGAGGACGAGCTTGCGCGCTTTGAGGATAAAGCGCGTGACATCGAGAAGCTCCTCGCACGCTGCCG GCCCCAACGCCTCCACTTGTACGAGCATAATGGCCTGATGTTCTCGCAGCCGCTCGAGGTGCTTGAACTGGTGATGATGG GCCGTGCTGGCAGGGTGCCCCTGGTCCGAGGCCATCTCGGCTCCGCCATCTATGGGGAACGGGTGATCTTCGGCCGGGAG ACGGTCGAGGTGCGGGCGCATGACACAAGCCGGTTCGTCGGCCTTTTCGGCATTCGCGAATATCCGGCCATGACGCGGCC AGGGCAGATGAACGCGCTCCTCAGCCAGGATTTCGCGTTCGTCGTGACGCAGTCTTTCGCGTTCATGGGCAAAGCGCGGG CCTCGGAGCGGTTGCGTCGGCGTCAGAACCAGATGGCTTCGACGGAGGATGCCGCTGCGAGCCAGGCGCTTGAGCTTGCC GACGCGGCCGACGATCTGCAGAGCAATCGCTTTGTCCTGGGCGAGCATCATTTCTCGCTCGCGGTCTTCGGTGAAAATCA GAAGCGACTGGCCGAAAATCTCTCGACCGCTCGGGCGGCGCTCGCCGACGCGGGTCTGGTAGCCGCTCGGGAGGGTCCGG CGCTGGAGGCGGCCTTCTGGTCGCAGCTTCCTGGCAACTTCGCATGGCGTGCGCGGCCAGCGGCGATCACGTCACGCAAT TTTGCCGCGCTCTCGCCGTTCCACACTTTCCCCGCCGGCAAGCCCGATGGCAATCACTGGGGTGCTGCGATCGCGTTGAT GAAGACCGCAGCCCAGTCTCCCTTCTATTTCAACTTCCATGTCAACGACCTTGGCCACACGCTGATCATTGGCCCGTCGG GCGGCGGCAAAACCGTCGTCCAGAATTTCCTGATGGCGCAGCTGGAGAAAACCGGCGCGCAGCAGATCTTCATCGACAAG GATCGAGGGGCCGAGATCTATGTGCGGTCATCCGGCGGCACCTATCTTGCGCTGCGCAATGGGGTGCCGACCGGGTTTGC GCCGCTGCGCGCGCTTGAGCAGACCCCGGGCAACATCGTCTTCCTCGGCAGGCTGATCCGCCATCTGGTGACCCCATCGG GCACCCAGCTCGGCGTCACGCAGGAGCGGATGATAGACGAGGGCATCCTCTCGATCGGACGCCTTCCCCCGGAGGAGCGG TCCATCCTCGCGCTTCGCCAATTGCTCGGACAGCGCGATCCGGAAGGGATAGGCGCGAGGCTTGAGAAATGGTCGCGCGG CGGCGCACTCGGCTGGGTGTTTGACAATGACAGGGACGAGCTGACCCTCGAGGCCAGGTTCATCGGTTTCGACATGACGG ATTTCCTCGACAATCCCGAGATCCGCACGCCGCTGATGATGTATATGTTCCACCGGATTGATGCCCTGCTCGATGGCCGT CGCCTCGTGATCGACATCGACGAGTTCTGGAAGGCGCTGGGCGATGATGCGTTCCGCGCCTTCGCGCAGGACGGCCTGAA GACCTACCGGAAGCAGAATGCCTTTCTGGTGTTCGGGACGCAAAGCCCGGCTGACGCTCTGCGATCGGACATCTCGCACA GCATAATGGAGCAGGTCGCCACCAAGATCCTCTTGCCCAACCCCCATGGCCGAGAGGTCGATTATATCGACGGGCTCGGC CTCACCCGCGCCGAGTTCAAGCTCATCAGAAACGATCTGATCCCCGAAAGTCGGCGATTTCTGGTCAAACAGGGTCACGA TTCCATCGTGGTGGAACTCGATCTCGGCGGCCTGTCCGACGAGTTGGCCGTTCTTTCGGGCACCACCGAAACCGTCGGAA TCCTCGATCAGGTTCGCCGCGACCAAGGCGACGATCCCAGCCAATGGCTGCCCGTCTTCCACGAGCGCCGCCGTGCCACC ACCAAAAGGAAAGGATAA Protein sequence : MASRANSLGGAAARTPWRILKNEADPARYLPYARHIDDNVIALDGRDLMMMFKLDGLAFETADPIHLNDWHEKLNGTLRN IADDRLAIWTHIVRRPITDYPEGEFRSAFAADLDAKYRARVTAKRMFVNELYLTLIMRPSVGSADRTGELLRRLASARKE GTEVDEDELARFEDKARDIEKLLARCRPQRLHLYEHNGLMFSQPLEVLELVMMGRAGRVPLVRGHLGSAIYGERVIFGRE TVEVRAHDTSRFVGLFGIREYPAMTRPGQMNALLSQDFAFVVTQSFAFMGKARASERLRRRQNQMASTEDAAASQALELA DAADDLQSNRFVLGEHHFSLAVFGENQKRLAENLSTARAALADAGLVAAREGPALEAAFWSQLPGNFAWRARPAAITSRN FAALSPFHTFPAGKPDGNHWGAAIALMKTAAQSPFYFNFHVNDLGHTLIIGPSGGGKTVVQNFLMAQLEKTGAQQIFIDK DRGAEIYVRSSGGTYLALRNGVPTGFAPLRALEQTPGNIVFLGRLIRHLVTPSGTQLGVTQERMIDEGILSIGRLPPEER SILALRQLLGQRDPEGIGARLEKWSRGGALGWVFDNDRDELTLEARFIGFDMTDFLDNPEIRTPLMMYMFHRIDALLDGR RLVIDIDEFWKALGDDAFRAFAQDGLKTYRKQNAFLVFGTQSPADALRSDISHSIMEQVATKILLPNPHGREVDYIDGLG LTRAEFKLIRNDLIPESRRFLVKQGHDSIVVELDLGGLSDELAVLSGTTETVGILDQVRRDQGDDPSQWLPVFHERRRAT TKRKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB4 | YP_001610000.1 | VirB4 protein | Virulence | Not named | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Swit_5007 | YP_001260390.1 | type IV secretion/conjugal transfer ATPase | VFG2233 | Protein | 0.0 | 52 |
