Gene Information

Name : Swit_5003 (Swit_5003)
Accession : YP_001260386.1
Strain :
Genome accession: NC_009508
Putative virulence/resistance : Virulence
Product : P-type conjugative transfer protein VirB9
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3504
EC number : -
Position : 120555 - 121412 bp
Length : 858 bp
Strand : -
Note : TIGRFAM: P-type conjugative transfer protein VirB9; PFAM: Conjugal transfer protein TrbG/VirB9/CagX

DNA sequence : 
GTGAAGCGCCTTCTCTCCATCGCGAGCCTTCTCACCATAATAGCGACACCCGCCCTCGCGGAGGACACCCCGCGCGGTGG
GCCGGCGGATCCGCGCGTGAAGTTCGTCGAATATCAGGAGACCCAGGTCTACCGGATCGTCGGCACATTTCGGACGGCGA
CCCAGGTGGTGCTCGGGGCCGACGAGACGATCGAACATGTCGCGCTCGGCGACACCGTCTCATGGGAAGTGGCGGTTGCC
GGTCATATCCTGTTCCTGAAACCCCGCGAGCGGGCGGGACCGACCAACCTCATCGTCACGACCAATCGCGGGGGCGAACT
GCGCAACTACGCCTTCGAACTGACCGCGCGCCGGGGACCGATCGGCAGCGGGAGCCGTGACACATTCTTCCAGGTTCGGT
TTCGCTACCCGCGCGATGAGGCCGATCGTGCCGCGCGCATGCGCGCCACCCAGGAGGCGCAGCGCGTCGCCGCGCTGCAG
GCGAGTGCCGTTCGGGGCGCTCTTGACCATGGCGTCATCGATGGACCGCGCAATTTGAACTACAAGGTCCAGGGTGCGAG
CGACCTTCAGCCGTCGGAGATCTCCGACAATGGCCAGTTCACGGTCCTGCGTTTCCCCGGCAACCATGAAATCCCGGCGA
TCTATCTGGTGCGACCGGACGGCTCGGAGTCCTTGGTCCCGTTCGATGTCCGCGACGAGTTCGTGGTCGTCCACGCCGTG
GCGGCTCAACTGCGCCTGCGCCGGAACCGGGAGGTGCTGTGCATCTATAATCTCGCGCCGACACCTTATGGCGTCGATCA
CGGCACCAACACCGCATCGCCGCATGTCGAGCGCACCATACAAGACCCGAAGGAGTGA

Protein sequence : 
MKRLLSIASLLTIIATPALAEDTPRGGPADPRVKFVEYQETQVYRIVGTFRTATQVVLGADETIEHVALGDTVSWEVAVA
GHILFLKPRERAGPTNLIVTTNRGGELRNYAFELTARRGPIGSGSRDTFFQVRFRYPRDEADRAARMRATQEAQRVAALQ
ASAVRGALDHGVIDGPRNLNYKVQGASDLQPSEISDNGQFTVLRFPGNHEIPAIYLVRPDGSESLVPFDVRDEFVVVHAV
AAQLRLRRNREVLCIYNLAPTPYGVDHGTNTASPHVERTIQDPKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB9 YP_001610349.1 VblB9 protein Virulence Not named Protein 2e-48 45
virB9 YP_001610005.1 VirB9 protein precursor Virulence Not named Protein 2e-45 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Swit_5003 YP_001260386.1 P-type conjugative transfer protein VirB9 VFG2238 Protein 3e-45 44