|
Name : Swit_5398 (Swit_5398) Accession : YP_001260273.1 Strain : Genome accession: NC_009507 Putative virulence/resistance : Unknown Product : transposase Tn3 family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4644 EC number : - Position : 305440 - 308529 bp Length : 3090 bp Strand : - Note : PFAM: transposase Tn3 family protein; KEGG: xcv:XCVb0015 Tn5045 transposase DNA sequence : ATGTTTTGCGAAGAAATTCGCCTTGTTTATCGGCATGGGCCGTCCCCTTCGCAAAAGTTGAAAGTTTCGCACGGTATGCC CACCCGTCACCTCACTGACGCCCAGCGTCAGGGCTTTGCCCGCTTTGATGGCGAACCGTCGGCCGATCAACTCGCGCGAT ATTTCCATCTGGACCAAACTGATCGCGACCTCATTGGAACTCTGCGCGGCGACCACAATCGGCTCGGCTTTGCCGTGATG CTGACGAGCGCCCGGTTTCTGGGCGCATTTCCAGTCTCGCCCGCCGAGATCCCAGCGTCGGTCCTGGCGGCCGTGATCGA ACAACTCGCTCTTGAACCCGGCACGGACGTGGACGCCTATTTTGCGGGAAGCCGACGCATCCGGCACCTCGCGCTCATCC GGACGCACTGCGGCTTCACGGACTTTGGCGACAACGCGGTGGCACGTTTCCGGCTGACCCGATGGCTCTACGCCCTTTGC TGGAGCGGCGACGATCGGCCCGGCCCCCTGATTGATCGAGCTGCGGCCTGGCTGATCGCCAACAAGGTGCTGCTGCCGGG CGTCACGGTCGTCGAGCGCCTGGTTGGCAGGATCCGCGATCGTGCGCGGACCAGGCTTTGGCGCCATCTGGTCGCCAGCT TGAGCGATGACCAGCGCGTGCGCATCGCCGCGCTGTTTGACGATGGCGACACATCCACGTTCGCCGCCCTGGACGCGCTC CGGACCGTTCCCTCCAAGCGCATGCCGACCGAACTCTTCCGACACCTTGATCGGCTCGATGCGGTCCGGGCGTTCAATCT GCGGCCGGCGCCACCGCGGGGCGTTCCCGCCACAACCCTTGAGCGGCTCGCGCGGGTAGCGCGCGTCGGCAAGCCCTCGG CCATCGCCGCCCTTCAGGAGCCTCGTCGAACCGCGACCGTAGCCGCGCTCTTCCATACGCTCGAAGCGGCGGCCCAGGAC GACGCCGCCGAGCTGGCCGAGGCTCTGCTCGCCGACTTGGTGAAAGGGGCTGAAGCCGCCGACAAACAGGCCCGCCTGCG CAGTCTGCGCGATCTCGATGGCGCCGCGATGCTGCTCCACGCAATGGGTCTGTTGGTTTTGACCGACGACGCCCTGCCCC TCAATGAATGGCGAGATGTGCTCTTCGAGCGGTTGCCCCGTCCCGACATCGAGGCCGCCATGTCCAAGGTGGAGGCGATC GCCAAGCCCGCGGAGACCAAGCCCTATGATCAACTGCGAACAAAATGGCGGAGCGCCCGGCGATTGTTCTTTGAAATCGC TACCCGCATCGAGACCGACGCTGCCCCAGGTGGCAAAAACGTCAAGGCCGCGATCAGCTACCTCAAGGGCGTGGACGACT GGTCCTCTCTCGTCAAGATGCGCGGCGCACCGATCGCTGCGGTCTCGAAGGCGTGGAGGCAACATGTCCTGGATGACGAT GGCAGGATGCGCGACCCGAAGGCCTATGTCTTCGCGATCATCGATGCGTGGCGTCTGGCGATCAAGCGTCGCGATGTGTT CGCCAAGCCCGGCATCCGATACGGGGATCCCCGGCGCGGGATGCTCGAGGGCGAGTCCTGGCACAATTCCAGGTTGATGG TAGCACGCGCCCTGGGCCGATCTCTGGAAGCCGACATTGAGATTGACGGTCTCTCCCGCCTTCTCGACGAGGCATATCGA CATGTCGTTGCGCGCGCCGGCGACAATCCGGACCTGCGTTTTGAGACGGTCGCCGACAAGATGGGGATTGTGGTCACGCC CCTCGACAAGCTTGATGAACCCGAGAGCCTTCGAGCACTTCGCGCCGCCGTCCAAACGCGCATGCCGAAGGCCGGAATGC CCGACATCTTTCTTGAAGTCATGGCGCGAACCGGATTTGCCAAGTCCTTTACGCATCTGAGCGAGCGTCAGGCCACCGTC GAGCACTTCGAGATAAGCCTGTGCGCGACCCTGGTCGGCGGCGCCTGCAACATCGGTCTTGAGCCGATCGTGCGCCCGGA ATTTGCGGCTCTGCGTCGCGACCGTCTTTCTTGGGTCGGTCAGAATTTCATTCGGCCCGAGACCATCGCCGCGGCCAACG CCGCGATCGTTTCCGCTCACAGTCGTCTGGATATCGTCCAACATTGGGGCGCAGGCGAGGTGGCCAGCGCCGACGGCATG CGTTTTGTCGCTCCGTCGAGCGCCATACACGCCGGGCCCAACCCCAAATATTACGGCCAGGAGCGCGGCGTCACTTGGTA CAACATGATTTCCAATCAGTTCAGCGGTCTGACCGGAGCGGTCATCCCCGGCACGTTGCGCGACAGCCTGGTCGTCCTGG CTCTCCTGCTGGAGCAGGAAACCGAGCTCGATCCTCTGGAGATCATGACCGACACCGCCGCCTATTCCGACGCCATTTTC GGTCTGTTCTGGCTCTTGGGCTACCGGTTCAGCCCCCGTCTGGCGGACATCGGCGACGCCAAACTCTGGCGTATCGACCG CCAGGCGAGCTATGGGCCGTTCGATCAGACCGCCTGGGGCAGGGTTAAAATCAATCTGATCCGGGAAAACTGGTCCGACC TTATCCGCTTGGCCGGATCGCTCAAGCTCGGCCACCTCAAGGCCGCAGGCGTCATGCGAATGCTGCAGGTCAAAGACCGC CCAACAACGCTGGCCAAGGCCCTGTCTGAACTCGGCCGCATCATCAAGACGCTGCATATCCTGCGATACATCGATGACCG GCCGTTCCGGCGACGAATATTGTTTCAGCTCAACCGGCAGGAATTGCGCCACAAGCTCGGTCGGCGCGTCCATCACGGCG ATCGGGGCGAAATCAGAAGCCCTCTGCGTCAGGGCCAAGAGGAGCAGCTTGGGGTCCTCGGTCTGGCCCTCAACTCCATC GTCCACTGGAACGCTGTCTACATGCAGGAAACCGTGCGCCAACTCAGCGAGGCCGGGACGCCGCCGCTGCCCGCCGATAT CGCTCGGCTCTCGCCGATATCTTGGCGTCACATCAATTTCCTCGGCCGCTACGACTTCTCCGTGCCTGACGCCGTCGCAA ACGGCGGCCTCAGACCGCTACGCCAACCTAATTCCGAATGGGACTTTTGA Protein sequence : MFCEEIRLVYRHGPSPSQKLKVSHGMPTRHLTDAQRQGFARFDGEPSADQLARYFHLDQTDRDLIGTLRGDHNRLGFAVM LTSARFLGAFPVSPAEIPASVLAAVIEQLALEPGTDVDAYFAGSRRIRHLALIRTHCGFTDFGDNAVARFRLTRWLYALC WSGDDRPGPLIDRAAAWLIANKVLLPGVTVVERLVGRIRDRARTRLWRHLVASLSDDQRVRIAALFDDGDTSTFAALDAL RTVPSKRMPTELFRHLDRLDAVRAFNLRPAPPRGVPATTLERLARVARVGKPSAIAALQEPRRTATVAALFHTLEAAAQD DAAELAEALLADLVKGAEAADKQARLRSLRDLDGAAMLLHAMGLLVLTDDALPLNEWRDVLFERLPRPDIEAAMSKVEAI AKPAETKPYDQLRTKWRSARRLFFEIATRIETDAAPGGKNVKAAISYLKGVDDWSSLVKMRGAPIAAVSKAWRQHVLDDD GRMRDPKAYVFAIIDAWRLAIKRRDVFAKPGIRYGDPRRGMLEGESWHNSRLMVARALGRSLEADIEIDGLSRLLDEAYR HVVARAGDNPDLRFETVADKMGIVVTPLDKLDEPESLRALRAAVQTRMPKAGMPDIFLEVMARTGFAKSFTHLSERQATV EHFEISLCATLVGGACNIGLEPIVRPEFAALRRDRLSWVGQNFIRPETIAAANAAIVSAHSRLDIVQHWGAGEVASADGM RFVAPSSAIHAGPNPKYYGQERGVTWYNMISNQFSGLTGAVIPGTLRDSLVVLALLLEQETELDPLEIMTDTAAYSDAIF GLFWLLGYRFSPRLADIGDAKLWRIDRQASYGPFDQTAWGRVKINLIRENWSDLIRLAGSLKLGHLKAAGVMRMLQVKDR PTTLAKALSELGRIIKTLHILRYIDDRPFRRRILFQLNRQELRHKLGRRVHHGDRGEIRSPLRQGQEEQLGVLGLALNSI VHWNAVYMQETVRQLSEAGTPPLPADIARLSPISWRHINFLGRYDFSVPDAVANGGLRPLRQPNSEWDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ACF06166.1 | transposase | Not tested | Tn5036-like | Protein | 6e-177 | 42 |
