|
Name : lpdA-1 (BOV_A0459) Accession : YP_001257493.1 Strain : Genome accession: NC_009504 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 478128 - 479522 bp Length : 1395 bp Strand : + Note : E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGAGCGAGATTTCCTGCAAACTTCTGATTATCGGCGGCGGTCCCGGCGGCTATGTATGCGGCATTCGCGCAGGCCAGCT TGACATCGATACGGTGCTGGTGGAAAAGACGCGCCTTGGCGGCACCTGCCTCAATGTCGGCTGCATTCCGTCCAAGGCAT TGATCCATGCGGCAGATGAATTTCATCGCCTCACCACTTTCGCGGCCAAAAGCCCGCTTGGCATCACGACGCAAAACCCG GCCATCGATTTCGCCCGGACGCTGGAATGGAAGGATGGAATCGTCCATCGGCTGAACAGTGGCGTTGCCGGGCTTTTGAA GCGGTCGCGCGTGCGCATGTTTCAGGGGCAGGCGCGCTTTCAGGATGGCAAGACGGTGCTGGTCGATACGGATACGGGCC GCCAGACCATTCATGCTGAAAACATCGTGATCGCAACCGGCTCGGTGCCGGTCGAAATTCAGGCTTTGCCCTTCGGCGGC AATATCATCTCCTCCACCGAGGCGCTTTCTCTGGAAAAGATACCGGAGCGGCTGGCCGTGGTTGGCGGCGGTTATATCGG GCTTGAAATTGGAACGGCCTTCGCCAAACTTGGCTCCAGGGTGACGGTCGTGGAAGCGACCGACCGGATTCTTCCCCAAT ATGATGCGGAACTGACCCGCCCCGTAATGGCGCGCCTCAAGACGCTTGGGGTGGAGGTACTGACCGGAACGTCCGCCAAA GGGCTGTCCGCGGACGGCAAGGCGCTGGAAATCCGCACGCAGGACGGTGCCGTCAAGGCGATTGAGGCTGACAAGATCCT CGTGACCGTCGGGCGCAAGCCGCAGACGGATGGCTGGGGCTTAAGCGAAATCCGGCTGGATATGGATGGCCGTTTCATCC GCATCGATGATCGCTGCCGCACCTCCATGCGCGGGATTTATGCCATTGGCGACGTCACCGGCGAACCGATGCTAGCGCAC CGCGCCATGGCGCAAGGAGAAATGGTGGCCGAAATAATTGCGGGCGGTAAACATGCCTGGGACAAGCGGTGCATCCCCGC TGTCTGCTTTACCGACCCGGAAATCGTGACCGTTGGCCTTTCGCCCGATGAAGCGCGCAAGGCCGGGCATAATATCCAGA CTGGCCTTTTCCCGTTTCAGGCCAATGGCCGCGCCATGACGATGGAACGCGATGATGGCATAGTGCGCGTGGTTGCCCGC GCGGACAATCACGTCATCTTGGGCATTCAGGCAGTCGGAGCCGGTATTTCGGAACTGTCGGCAGCTTTTGCTCAGGCGGT GGAAATGGGTGCACGTCTGGAAGATATCGCCGCAACGATCTATGCCCACCCGACCTTGGGCGAAGGCTTTGCCGAGGCCA GCATGAAGGCGCTTGGCCACGCTCTACATGTTTGA Protein sequence : MSEISCKLLIIGGGPGGYVCGIRAGQLDIDTVLVEKTRLGGTCLNVGCIPSKALIHAADEFHRLTTFAAKSPLGITTQNP AIDFARTLEWKDGIVHRLNSGVAGLLKRSRVRMFQGQARFQDGKTVLVDTDTGRQTIHAENIVIATGSVPVEIQALPFGG NIISSTEALSLEKIPERLAVVGGGYIGLEIGTAFAKLGSRVTVVEATDRILPQYDAELTRPVMARLKTLGVEVLTGTSAK GLSADGKALEIRTQDGAVKAIEADKILVTVGRKPQTDGWGLSEIRLDMDGRFIRIDDRCRTSMRGIYAIGDVTGEPMLAH RAMAQGEMVAEIIAGGKHAWDKRCIPAVCFTDPEIVTVGLSPDEARKAGHNIQTGLFPFQANGRAMTMERDDGIVRVVAR ADNHVILGIQAVGAGISELSAAFAQAVEMGARLEDIAATIYAHPTLGEGFAEASMKALGHALHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 5e-79 | 42 |
