Gene Information

Name : CBO0393 (CBO0393)
Accession : YP_001252937.1
Strain : Clostridium botulinum ATCC 3502
Genome accession: NC_009495
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 463419 - 463757 bp
Length : 339 bp
Strand : +
Note : Similar to Clostridium acetobutylicum single-strand binding protein 1 Ssb1 or cac0945 SWALL:Q97KH4 (EMBL:AE007610) (110 aa) fasta scores: E(): 2.3e-17,47.66 38d in 107 aa

DNA sequence :
ATGAATAGAGTTATGCTCATAGGCAGATTAACTAAAGACGCAGAACTTAAGCAGATAGAGGATAGAGATGTTTCTTTATT
AAGATTTGTAATAGCTGTAAATAGATATTACAACAAAGAAAATTCTAAGACTGATTATATACCTATTGTTGTTTGGGGAA
GACATGCTGAAGCTATACATAAGTATATGAAAAAGGGTAAATTAATTAGTGTTGTGGGAAGAATACAGGCTAGAAATTAT
GAAGATAAAAATGGTAATAAAAAGTATGGAATAGAAATAGTCTCTAATGAGATAAAATTCTTGGACCCTAAAAAAATAGA
TAAAGTTGTTAGTAACTAA

Protein sequence :
MNRVMLIGRLTKDAELKQIEDRDVSLLRFVIAVNRYYNKENSKTDYIPIVVWGRHAEAIHKYMKKGKLISVVGRIQARNY
EDKNGNKKYGIEIVSNEIKFLDPKKIDKVVSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 6e-17 42
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-21 42
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-20 41