Gene Information

Name : CBO0274 (CBO0274)
Accession : YP_001252817.1
Strain : Clostridium botulinum ATCC 3502
Genome accession: NC_009495
Putative virulence/resistance : Virulence
Product : peptide ABC transporter Pep4E family, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 322585 - 323355 bp
Length : 771 bp
Strand : +
Note : Similar to Clostridium tetani ABC transporter ATP-binding protein ctc00394 SWALL:Q898P9 (EMBL:AE015937) (256 aa) fasta scores: E(): 1.2e-81, 95.31 38d in 256 aa

DNA sequence : 
ATGTCAATTTTAAAAGTTGAAAATATAACAAAAATATATGGTGGAAAAAAGGGTGGAATGAAATTTAAAGCGCTAGATAA
ATTTAGTTTAGAAATTGAAAAAGGGGAATTCGTGGGAGTAATGGGACCTTCAGGTAGTGGTAAAACCACATTGTTAAATA
TAATGGCAACTATAGATACTCCTACATCAGGAGAACTTTTTATAAATGGTACAAATCCTATAAAATTAAATGAGAAAAAT
ATTGCTCTGTTTAGAAGAAAAGAACTAGGTTTTATATTTCAAGATTTTAATCTCTTAGATTCTTTGTCTATTAAGGAAAA
TATAATATTACCACTTGTATTAGAGAAGATTAAAGTACGTGAAATAGAAAAGAAAGTAGAAGACATTGCAAATCTTTTAA
ATATTAAAGATATTTTAAATAAAAAGCCTTATGAAATTTCAGGAGGTCAGCAGCAAAGAGCAGCCTGTGCTAGAGCACTT
ATTCATAATCCTTCTATAATCTTAGCGGATGAACCTACAGGAAATCTTGATTCTAAAGCATCTCAAGATGTTATGGAAAC
TTTAACAAATCTAAATGATAAAAAAGAAGCTACTATAATGATGGTTACTCATGATCCTTTTTCTGCAAGTTTTTGCAAAA
GAATAATTATGATTAAGGATGGAAAGTATTTTTTAGAAATTGTGAATGGAGGAAATAGGCAAGCATTTTTTAAGGAAATT
ATGGATTCTCTTTCACTGTTAGGAAGTAGATCAAACAATTATACATTGTAG

Protein sequence : 
MSILKVENITKIYGGKKGGMKFKALDKFSLEIEKGEFVGVMGPSGSGKTTLLNIMATIDTPTSGELFINGTNPIKLNEKN
IALFRRKELGFIFQDFNLLDSLSIKENIILPLVLEKIKVREIEKKVEDIANLLNIKDILNKKPYEISGGQQQRAACARAL
IHNPSIILADEPTGNLDSKASQDVMETLTNLNDKKEATIMMVTHDPFSASFCKRIIMIKDGKYFLEIVNGGNRQAFFKEI
MDSLSLLGSRSNNYTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CBO0274 YP_001252817.1 peptide ABC transporter Pep4E family, ATP-binding protein CP001581.1.gene598.p Protein 1e-34 48
CBO0274 YP_001252817.1 peptide ABC transporter Pep4E family, ATP-binding protein CP001581.1.gene798.p Protein 3e-34 44
CBO0274 YP_001252817.1 peptide ABC transporter Pep4E family, ATP-binding protein NC_012469.1.7686878. Protein 7e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CBO0274 YP_001252817.1 peptide ABC transporter Pep4E family, ATP-binding protein VFG0869 Protein 1e-14 41