Gene Information

Name : ribD (CBO2866)
Accession : YP_001255365.1
Strain : Clostridium botulinum ATCC 3502
Genome accession: NC_009495
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 3046774 - 3047871 bp
Length : 1098 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGATTATAATTTTTATATGGAAAAAGCCTTGAAACTAGCTGAAAGAGGTGAGGGTAAAGTTAATCCTAATCCTAA
AGTAGGAGCTATAGTAGTTAATAACAACAAAATAATTGGAGAAGGTTATCACAAATATTTTGGAGGACCTCATGCAGAAG
TTTATGCTCTTAAAGAAGCAGGAGAAAAGGCTAAAGGGGCTACTATATATGTTACATTAGAGCCCTGCTCACATTATGGT
AAAACTCCTCCCTGTGCAGAGTCTATAGTAAAGATGGGAATATCTAAGGCTATTATAGCTATGAAAGATCCCAATCCTTT
AGTTGAGGGTAGAGGGATAGATATTTTAAAGCAAAATGGAATAGAAGTTATAACAGGGATTATGGAAAAAGAAAGTAAAA
AATTAAATGAAGTATTTATAAAATACATAACTAAAAAGAAACCTTTTGTAGTTTTAAAAACTGCTTCTACCTTAGATGGC
AAGATTGCTACAAAAACAGGAGAATCAAAATGGATAACAGGAGAAGAGGCAAGATATAAAGTACATCAAATAAGAAATGA
TTTGTCAGGAATAATGGTAGGAATAGGGACAATTATAAAAGATAATCCTCTTTTAAATACAAGAATAGAAAGAGGAAGAA
GTCCAAAAGCAATAATAGTAGATTCTAGTCTTAGAATTCCATTAGAGTCTAAAATATTAGAAACTCTTAATGAAAGAACT
ATTTATATAGCAACAACTAAAAAACATAACAATTTTTCAAAAAAGAATGCTTTAGAAAATTTAGGGGCTAAGGTTTTAGA
GTTTGAGGAAAATGAAGAGGGAAAAGTTCCATTGAATGAATTAATGCAATATTTAGGATCAGAAGGAGTGGATAGCATTC
TTTTAGAGGGAGGCAGCACATTAAATTTTTCTGCACTAAAAGAAGGGATAGTAGATAAAGTTATGTGTTTTATAGCACCC
AAGATAATGGGAGGACAGGATTCAAAAAATATGATAGGTGGAAATGGGGTAGAAAGTTTAAAAGATATATTTAATCTACA
AAACTTAAAATTTGAAAAAATAGGGCAGGATATACTTATTGAAGGCTATGTATATTAG

Protein sequence :
MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVNNNKIIGEGYHKYFGGPHAEVYALKEAGEKAKGATIYVTLEPCSHYG
KTPPCAESIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGIEVITGIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDG
KIATKTGESKWITGEEARYKVHQIRNDLSGIMVGIGTIIKDNPLLNTRIERGRSPKAIIVDSSLRIPLESKILETLNERT
IYIATTKKHNNFSKKNALENLGAKVLEFEENEEGKVPLNELMQYLGSEGVDSILLEGGSTLNFSALKEGIVDKVMCFIAP
KIMGGQDSKNMIGGNGVESLKDIFNLQNLKFEKIGQDILIEGYVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-53 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-53 43