Gene Information

Name : CBO1224 (CBO1224)
Accession : YP_001253748.1
Strain : Clostridium botulinum ATCC 3502
Genome accession: NC_009495
Putative virulence/resistance : Resistance
Product : oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1344641 - 1345315 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
TTGAGTATAATTAAAGCTACTGATGTAAAAAAAACTTTTACTATAGGCAAGATGAAAGTAGACATACTTAAAGGGGTTTC
TGTAAAAATTGAAAAGGGTGAATTTGTTGCTATCATTGGTGAATCTGGTTCTGGTAAATCTACCTTTCTAAATATATTAG
GTGGTTTAATGCCTCCTTCCTCTGGTGATATTTTTATAGAAAATGAAAAAATCAATGGTCTTTCTGAAAATAATTTAGCT
TTATTTAGAAGACATAATATAGGCTTTGTTTTTCAGTCCTATAATTTAATCCCTCAACTTACAGCTTTAGAAAATGTGGA
AATGCCTCTTATTTTTTCAGGGATTTCTAAAAAAGAACGAAAAAATAGAGCCTTTGAAATGCTTAAAAAAGTTGGGCTTG
AAGAAAGAGCTCATCATAAGCCTTCTGAACTATCCGGTGGACAACAGCAAAGGGTTTCCATTGCTAGAGCTCTAGTAAAC
TATCCTAAAATAGTGCTTGCTGATGAACCTACTGGAAATTTAGATAGCAAAAATGGTACAGAAATTCTAAATATATTAAA
AGAATTAAACGAAACCACTGGACAAACCTTTGTAATTGTTACTCACTCTTCTCAAGTTTGTGATTATGCAAATAAAATAA
TAAAAGTGGTAGACGGAAAAGTATTCAATAACTAA

Protein sequence : 
MSIIKATDVKKTFTIGKMKVDILKGVSVKIEKGEFVAIIGESGSGKSTFLNILGGLMPPSSGDIFIENEKINGLSENNLA
LFRRHNIGFVFQSYNLIPQLTALENVEMPLIFSGISKKERKNRAFEMLKKVGLEERAHHKPSELSGGQQQRVSIARALVN
YPKIVLADEPTGNLDSKNGTEILNILKELNETTGQTFVIVTHSSQVCDYANKIIKVVDGKVFNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-27 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CBO1224 YP_001253748.1 oligopeptide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-50 50
CBO1224 YP_001253748.1 oligopeptide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-46 48
CBO1224 YP_001253748.1 oligopeptide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-42 47
CBO1224 YP_001253748.1 oligopeptide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-48 46
CBO1224 YP_001253748.1 oligopeptide ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-37 42