Gene Information

Name : LPC_1850 (LPC_1850)
Accession : YP_001251128.1
Strain : Legionella pneumophila Corby
Genome accession: NC_009494
Putative virulence/resistance : Virulence
Product : reverse transcriptase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 2799252 - 2800616 bp
Length : 1365 bp
Strand : -
Note : -

DNA sequence :
ATGCACTGGGGCGGAGCAACTCGTATTAGTGTTGAAGTCACTGTAATGGTGATGGAGCGAAGGGGTTGCGTTAAGTCGTT
AGCATTAATGTACAACTGGAAACAGGATGACATATTAGTGACAATAAAACCATTTAACATACCAAAGCAACTGGTCTGGC
AGGCTTATAAATTGGTGCGAGCTAATGCTGGCTCTGCTGGTATTGATAATCAATCCATTGATGAGTTTAGCCAAGACCTC
AAGGGCAACTTGTATAAGCTATGGAATCGCATGAGTTCAGGAAGCTACTTCCCGCCAGCAGTGAAAGAAGTGGCTATTCC
CAAGAAGCAAGGCGGTGTGAGGAAATTAGGCATACCCACAGTAGCGGACAGAATTGCGCAGATGACGGTGAAATTAATGA
TGGAGCCGCTGCTTGAACCGCATTTTCTGGATGATTCTTATGGGTACAGGCCTAATAAATCGGCGCTTGATGCGGTAGGT
GTTACAAGAAAACGGTGTTGGGAATATGACTGGGTAGTTGAATTTGACATCAAAGGACTGTTCGATAACCTATCCCATGA
GCTTCTCATGAAAGCCGTCAAACATCACATCAGCGATAGATGGATATTGTTGTATGTGGAAAGATGGCTGACTGCGCCAA
TTCAGGATCAACATGGAGGATGCCTGCCAAGAACGGCGGGCACGCCTCAGGGCGGTGTAATCAGTCCCTTATTGAGTAAT
CTGTTTTTGCATTATGCTTTTGATCATTGGATGACAAAGCATCACCCGGATAATCCGTGGTGTCGGTATGCCGATGATGG
GCTTGCCCATTGCCGGACAGAGAAAGAAGCGGAGCAGATGCTCAAAGAGATTGACAAACGGTTTAAGTCTCTTGGTCTTG
AAATCCATCCAGATAAGACAAAGATTGTCTACTGCAAAGACGGGGCGCGGAAAGGAAAATATAAAAATAAATCATTCGAC
TTTCTGGGCTATACGTTTAAAGCGAGACGAGTCAAAGTCAGGTCAAGGAACAGTTTCTTCATTGGTTTCACACCAGTGGT
ATCACTAAAGGCGGTGAAGGCAATGACATTGAAGCTGCGGAGAGGAAACTGGCGAAATAACACCTCCTTGAGTCTTCAAG
AACTGGCTGACTTCATCAACCCGATGCTTAGGGGATGGCTTGCGTATTACGGTAAATATTCACGCTCCTCGATGTATCGA
GTTTGGCGATGCGTCAATAACATGTTGTTGGCCTGGGCAAAGAAGAAGTATAAAACATTGGGCAGAAGCAGAACCAAAGC
AGGCAAATTAATGGAACGAATCCATAAAGAAATGCCTGCGCTTTTTGTCCATTGGCGCAAAGGTATGTTCGGTGCGTTGA
CTTAA

Protein sequence :
MHWGGATRISVEVTVMVMERRGCVKSLALMYNWKQDDILVTIKPFNIPKQLVWQAYKLVRANAGSAGIDNQSIDEFSQDL
KGNLYKLWNRMSSGSYFPPAVKEVAIPKKQGGVRKLGIPTVADRIAQMTVKLMMEPLLEPHFLDDSYGYRPNKSALDAVG
VTRKRCWEYDWVVEFDIKGLFDNLSHELLMKAVKHHISDRWILLYVERWLTAPIQDQHGGCLPRTAGTPQGGVISPLLSN
LFLHYAFDHWMTKHHPDNPWCRYADDGLAHCRTEKEAEQMLKEIDKRFKSLGLEIHPDKTKIVYCKDGARKGKYKNKSFD
FLGYTFKARRVKVRSRNSFFIGFTPVVSLKAVKAMTLKLRRGNWRNNTSLSLQELADFINPMLRGWLAYYGKYSRSSMYR
VWRCVNNMLLAWAKKKYKTLGRSRTKAGKLMERIHKEMPALFVHWRKGMFGALT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 7e-112 51
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 2e-82 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LPC_1850 YP_001251128.1 reverse transcriptase VFG1512 Protein 1e-82 46