Gene Information

Name : LPC_1389 (LPC_1389)
Accession : YP_001250688.1
Strain : Legionella pneumophila Corby
Genome accession: NC_009494
Putative virulence/resistance : Unknown
Product : putative IS5376 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 2248166 - 2249212 bp
Length : 1047 bp
Strand : -
Note : -

DNA sequence :
ATGATTCAATTAGAGGAGTCAAAAATGATTCATATTTTGTACAAGCAGGGATACAGTAAAAAAGCGATTGCTAGAAAATT
GGGTATGTCGATAAATACTGTTCGAAAATATCTTAAAAGTGGTTCAGAGCCTTATTACAAAAGGCGTGATAAAAAGCCAT
TAAAGCTTGACCCCTATAAAGCATATATTCAAAAAAGATTAAAAGATGCAACACCTCATTGGGTACCAGCTACTGTGATT
TATCGAGAGATTAAATTGTTTGGTTATGATGGATGCAGCTCTCAATTAAGAGCATATATGCATACTTTAAGGTCAAAAAA
AGAAGAGGTTATTGTTCGGTTTGAAACAGAGCCTGGACAGCAGATGCAGGTGGATTGGGCTCAATTCCGAAGAGGAAAGG
ATAGATTAAGTGCTTTTATTGCAACCATGGGATATTCCAGAGCATCTTATGTAGAGTTTGTCAGCGATGAAACCTTGGAA
ACGCTTATTGCATGCCATAAAAATGCATTCGAATATTTTGGTGGAGTTCCTTATACGATCCTATATGACAATATGAAAAC
AGTCATTATTGAACGAAATGGATATGGCCCAAGCCAACATCGATTTCAAGCTGGTTTTTGGGATTTTGCAAAACATACTG
GATTTCGTCCTAAAGTGTGTCAACCTTATAGGGCACAAACAAAAGGCAAAGTTGAACGCTTTATTCATTATTTAAAATAC
AGTTTTTATTTTCCTTTAGTTGGGCAATTGAAGGCACTTGGCTTAAGTTTAGATAAAGAGACAGCCAATATGCATGTTTT
AAAATGGCTAAATGAAATTGCTAATCAACGAGTACATGCTACAACAGGAGCAATTCCATTCGAACGACTTCTTGATGAAC
AAGCAAAACTACAACCATTGTCATCTACCTATTCTGGTAAATTATTTTCTCATTTGGAAAATAAGGAGGTTCACTATTTT
GCCTTTCAATTATTAGACAACACTGCAATGCAACATGAATTGTCAATTTATCAGAAACTACTCGAGCGCACAGAGGAGGC
TGCATGA

Protein sequence :
MIQLEESKMIHILYKQGYSKKAIARKLGMSINTVRKYLKSGSEPYYKRRDKKPLKLDPYKAYIQKRLKDATPHWVPATVI
YREIKLFGYDGCSSQLRAYMHTLRSKKEEVIVRFETEPGQQMQVDWAQFRRGKDRLSAFIATMGYSRASYVEFVSDETLE
TLIACHKNAFEYFGGVPYTILYDNMKTVIIERNGYGPSQHRFQAGFWDFAKHTGFRPKVCQPYRAQTKGKVERFIHYLKY
SFYFPLVGQLKALGLSLDKETANMHVLKWLNEIANQRVHATTGAIPFERLLDEQAKLQPLSSTYSGKLFSHLENKEVHYF
AFQLLDNTAMQHELSIYQKLLERTEEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 3e-77 48
y2411 NP_669718.1 transposase Not tested HPI Protein 3e-77 48
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 2e-77 48
api83 CAF28557.1 transposase Not tested YAPI Protein 2e-77 48
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 3e-77 48
unnamed CAA21403.1 - Not tested HPI Protein 3e-77 48
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 2e-76 48
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 2e-76 47
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 2e-76 47
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 2e-76 47
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-76 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LPC_1389 YP_001250688.1 putative IS5376 transposase VFG1461 Protein 1e-76 48
LPC_1389 YP_001250688.1 putative IS5376 transposase VFG1514 Protein 9e-77 47
LPC_1389 YP_001250688.1 putative IS5376 transposase VFG1626 Protein 9e-77 47
LPC_1389 YP_001250688.1 putative IS5376 transposase VFG1607 Protein 9e-77 47