Gene Information

Name : LPC_1388 (LPC_1388)
Accession : YP_001250687.1
Strain : Legionella pneumophila Corby
Genome accession: NC_009494
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2247375 - 2248169 bp
Length : 795 bp
Strand : -
Note : -

DNA sequence : 
ATGAATATTCAACATGAGCGTATTTTATCACTATGTGAACGCTTGAATTTATCAGCGATAGCGACAAATTACTCTTATCT
AGCTCAAGAGGCAGCAATTCATAATCAAGGATATAGTGATTTTTTAGAAAGTGTATTGACTGTGGAGTTACAGGAAAAAC
AATATCGAAGTCGAACCCTGCTCACTAAAATGGCTGGTTTTCCAATGATTAAAACAATAGATGATTTTGATTTTAAATTT
GCTTCTGGTGTACCAAAAAATAAAATCCGAGAACTGACTTCTTTGGCTTTCATTGAACGACAGGAAAACATTTTATTACT
TGGTCCTAGTGGATTAGGCAAGACTCATTTAGCGATTGCTCTGGGTTATTTAGCAGTTCAAGCAAACATTAAAACAAAAT
TTATTAGCGCAGCAGATTTGATGTTATTGCTTGAAACAGCTCATCGCCAAGGGCGATATAAAGATATTATGCGACGGGTT
ATTAATAATGCTCGACTGCTCATTATTGATGAAATTGGATATTTACCAATGAACCGAGATCAGGCAAATCATTTCTTCCA
AGTTATTGCAAATCGCTATGAAAAAGGTTCTATTATTGCCACCTCCAATCTCGCTTTTGGTCAATGGGACAATACTTTCG
CCGGCGATAAAGTATTAACAGCAGCTATGCTCGACAGGTTGCTCCATCATGCTCATGTCATTCAATGCAGAGGCGACAGT
TATAGATTAAAAGACAAATTTAAGGCCGGTTTAATTCAAAATCAGAAGGAGGAGCAAAATAATATAACTGATTAA

Protein sequence : 
MNIQHERILSLCERLNLSAIATNYSYLAQEAAIHNQGYSDFLESVLTVELQEKQYRSRTLLTKMAGFPMIKTIDDFDFKF
ASGVPKNKIRELTSLAFIERQENILLLGPSGLGKTHLAIALGYLAVQANIKTKFISAADLMLLLETAHRQGRYKDIMRRV
INNARLLIIDEIGYLPMNRDQANHFFQVIANRYEKGSIIATSNLAFGQWDNTFAGDKVLTAAMLDRLLHHAHVIQCRGDS
YRLKDKFKAGLIQNQKEEQNNITD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-60 62
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 9e-74 55
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 9e-74 55
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 9e-74 55
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 9e-74 55
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 9e-74 55
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-73 55
api84 CAF28558.1 putative transposase Not tested YAPI Protein 9e-74 55
unnamed CAA21402.1 - Not tested HPI Protein 1e-73 55
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-73 55
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-73 55
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-73 55
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 7e-73 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LPC_1388 YP_001250687.1 transposase/IS protein VFG1460 Protein 1e-60 62
LPC_1388 YP_001250687.1 transposase/IS protein VFG1606 Protein 5e-74 55
LPC_1388 YP_001250687.1 transposase/IS protein VFG1515 Protein 5e-74 55
LPC_1388 YP_001250687.1 transposase/IS protein VFG1627 Protein 5e-74 55
LPC_1388 YP_001250687.1 transposase/IS protein VFG1663 Protein 4e-73 54