Gene Information

Name : lysU (LPC_1218)
Accession : YP_001250528.1
Strain : Legionella pneumophila Corby
Genome accession: NC_009494
Putative virulence/resistance : Virulence
Product : lysine tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 2065727 - 2067217 bp
Length : 1491 bp
Strand : -
Note : -

DNA sequence :
ATGAGTGAAGAACATGTACATTTAGATGAAAGTGAAGTTTATCATATTCGCAAGCAAAAATTAGCGGAATTGCGCACAGG
TGGGTTTAATTTTCCAAACACTTTTCGCCGCGAACATTTAGCCGATGCTTTGCTGAAGCAATACTCTGAAACTGAGAAAC
AAACATTAGAACAAAAGCATGTGAAAGTATCTGTTGCAGGCCGAATCGTTCTGAGAAGAATTATGGGTAAAGCCAGTTTT
TTTCATATTCAGGATGTATCAGGTCGGATACAAGTTTATCTTCGTTCAAATGATCTTCCTGACATTTATGAACAGTTTAA
ACATTGGGATTTAGGAGATATTGTTGGTGTACAGGGTGAGTTGTTTAAAACAAACACTGGTGAACTGACCATTAATGCAG
AACATGTTGAGTTGTTAACCAAATCTTTAAGGCCACTTCCTGATAAATTCCATGGTTTGGCTGATCAGGAATTGAAATAT
CGAAAACGTTATGTTGACTTGATTGCAAATGAAGACAGTCGAAAAACTTTTCTAATACGGTCACATTTAATCAAAGCCTT
CAGAGAATTTATGGATGATAATCATTTTCTGGAAGTAGAAACACCAATGATGCATCCAATTCCTGGAGGTGCTTTGGCTC
GCCCTTTCGTAACTCATCACAATACATTGGATATGACCATGTATTTGAGGATAGCCCCCGAATTGTACTTAAAACGCTTG
GTTGTTGGTGGTTTTGAGAGAGTATATGAAATTAATAGAAATTTCCGTAACGAAGGAATTTCTACTCGTCATAATCCAGA
GTTCACGATGCTGGAATTTTACCAGGCTTATGCCGATTACAATGATTTGATGAATTTTACTGAACAATTGTTTCATTATC
TATGCGATAAAGTATTAGCTACTCGGCAAATAGAATATCAAGGCCAGGTCATTGATTTCAATAAACCTTTTGAACGGTTG
AGCGTAAAAGAAGCTATATTAAAATATCATCCTGATATTAAGGCGCAGCAGTTAGAAACGGTAGAGGGATGCAGAACACT
TCTGAATGATTTAGGTCTGCCTTATAAAGAAACTGATGGCCTGGGTAAACTACAAATTATTCTTTTTGAGGAGACAGTAG
AGCACCAATTATTTCAGCCCACTTTTATTACGGAATACCCTACAGAAATATCTCCTTTAGCGAGACGTTCTGATACCAAT
CCGGAAGTCACCGATCGATTTGAGTTTTTTATTGCTGGTCGTGAGATTGCGAATGGATTTTCTGAATTAAACGATGCGGA
GGATCAAGCTGAGCGCTTTCGAAAGCAAGTTGAAGAAAAGGATGCGGGTGATTTAGAAGCAATGCATTTTGATAGTGATT
ATATTGAAGCATTGGAATATGGCTTGCCGCCTACAGCTGGTGAAGGGATTGGAATCGATCGCTTGGTGATGTTATTTACT
AATTCGCAATCAATCAGAGACGTTATTCTATTTCCGCATTTGAGACAGTAA

Protein sequence :
MSEEHVHLDESEVYHIRKQKLAELRTGGFNFPNTFRREHLADALLKQYSETEKQTLEQKHVKVSVAGRIVLRRIMGKASF
FHIQDVSGRIQVYLRSNDLPDIYEQFKHWDLGDIVGVQGELFKTNTGELTINAEHVELLTKSLRPLPDKFHGLADQELKY
RKRYVDLIANEDSRKTFLIRSHLIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMYLRIAPELYLKRL
VVGGFERVYEINRNFRNEGISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLATRQIEYQGQVIDFNKPFERL
SVKEAILKYHPDIKAQQLETVEGCRTLLNDLGLPYKETDGLGKLQIILFEETVEHQLFQPTFITEYPTEISPLARRSDTN
PEVTDRFEFFIAGREIANGFSELNDAEDQAERFRKQVEEKDAGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDRLVMLFT
NSQSIRDVILFPHLRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-144 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysU YP_001250528.1 lysine tRNA synthetase VFG1668 Protein 1e-144 60