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Name : capD (LPC_2321) Accession : YP_001251589.1 Strain : Legionella pneumophila Corby Genome accession: NC_009494 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1165816 - 1167693 bp Length : 1878 bp Strand : + Note : - DNA sequence : GTGGTTTTTATAATGCAAAAAATAATCATATTGACAAAAAAAATCATTGCAAAACTCCCAGTAATTTTGTTTGATGTGGC CGCAATACCAGTTGCCTGGTATGCCGCTTACTGGTTGCGCTATAACATGCAGCCATATCCCAGCAGCCTGACATCCACCC ATTCTTTTATTGCTTTAGCTTTATTATCAATTGTTCAGATTAGTTGTTACTATTATTTTAAAATTTACAGAGGATTATGG CGTTTCTCTTCTCTGAATGATGTCATCAGGATACTGAAGGCTACTATCACAGCAATGGTTTTAGTAATCCCTGTTTTTTA CTTGACTTCAATTCTTCAGCACCTGCCCAGATCAGTTTTTCCTTTGTATTGCATTATCCTGGCTACCATCCTTTGCGGGG GAAGGTTGGTGATCCGTCTGCATTGGGATAAGCCTGGCAGAGGAAACAGGGAATTGGAAACGAAAAGAGTTTTGGTGGTT GGTGCCGGGCAGGCTGGTGAAGGCTTGGTGCGTGATTTGAAAAGAAGCAGTTATTATCGGCCAATAGGCTTTGTAGATGA CAATAAAAGCAAGAGAGGATTAGAAGTTCATGGAGTGCGGGTTCTGGGAACGACTAACCAAATTACCGAATTAGTCAATC AGTACGACGTGGATTTGATTTTCATTGCCATACCTTCTGCCAAATCGGCAACCATGCGAAGAATTGTAACGCTTTGTGAA CAAAGCCATGTGCCTTTTAGTACTTTACCCAGTATTTCAGCCCTGGCTGCGGGCCGGGTTGAAGTGAATGCGCTGAGGCC TGTGAATATTGAGGATTTATTGGGTCGGGATCAAGTGACGCTCGAATGGGAAAAAATTGCTCGTTCAATAGCAGGAAGAC GCATATTGATTACAGGCGGTGGTGGCTCAATCGGTTCGGAATTGTGCCGTCAGGTTATGGCTTTAGAGCCTGCGAGCATA GCCATTGTTGAGAATAGTGAGTTTAACCTGTATCGCATTGAACAGGAGTTGTTAAAGAGTTTTCCAGGTATCCCCGTTGA ATTGAGTTTAATCAGTGTGACAGACGAAATTGCGATTAATCACTTATTTCGTCGGTTTCAACCTGAAATTGTATTTCATG CGGCTGCTTACAAACATGTTCCCATGCTTCAGCATCAAGTACGGGTTGCTGTGTTTAATAATGTCATAGGTACTCAGGTT GTTGCCAAAGCCAGTGTAACATTCGGAGCTGAGAAATTCATTTTAATTTCCACTGATAAAGCAGTGAATCCAACGAATAT AATGGGAACTACCAAGAGAGTCGCTGAAATTTATTGTCAGAATTTAAATACACGAGTTAAAACCCAGTTTATTACGGTTC GTTTTGGAAATGTTCTGGGTTCAGCTGGAAGTGTGGTGCCTTTGTTCCAAAAGCAGTTGCAGGAAGGTGGTCCACTGACT GTGACCCATCCTGATATGCAAAGATATTTTATGACTATACCGGAAGCATGCCAGTTGATTTTGCAAGCGATGGTGAATGG GGAGGGTGGTGAAATTTTTGTCCTGGATATGGGAGAGCCGGTTAAAATCAGCTATCTTGCAGAGCAAATGATTCGCTTGG CAGGCAAAGAACCAGGAAGAGACATCATGATTGAATATACAGGTTTGCGTCCTGGCGAAAAAATGTATGAAGAGTTGTTT CATGAGACTGAACAGTTAACTTCAACAAAACATGAAAAATTATTCAAAGCAAGGTTTCGTGAACTGGATTGGAATGATTT GACACAAACCATGCGAATGTTACAGGCAGCTTGTATTGAGCATCAGGATGAGGAGTTGCTTGTTCTGTTAAAAAGTCTGG TGCCGGAGTTTCAATTGGAACCTATGGTTGAAGCTTAA Protein sequence : MVFIMQKIIILTKKIIAKLPVILFDVAAIPVAWYAAYWLRYNMQPYPSSLTSTHSFIALALLSIVQISCYYYFKIYRGLW RFSSLNDVIRILKATITAMVLVIPVFYLTSILQHLPRSVFPLYCIILATILCGGRLVIRLHWDKPGRGNRELETKRVLVV GAGQAGEGLVRDLKRSSYYRPIGFVDDNKSKRGLEVHGVRVLGTTNQITELVNQYDVDLIFIAIPSAKSATMRRIVTLCE QSHVPFSTLPSISALAAGRVEVNALRPVNIEDLLGRDQVTLEWEKIARSIAGRRILITGGGGSIGSELCRQVMALEPASI AIVENSEFNLYRIEQELLKSFPGIPVELSLISVTDEIAINHLFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQV VAKASVTFGAEKFILISTDKAVNPTNIMGTTKRVAEIYCQNLNTRVKTQFITVRFGNVLGSAGSVVPLFQKQLQEGGPLT VTHPDMQRYFMTIPEACQLILQAMVNGEGGEIFVLDMGEPVKISYLAEQMIRLAGKEPGRDIMIEYTGLRPGEKMYEELF HETEQLTSTKHEKLFKARFRELDWNDLTQTMRMLQAACIEHQDEELLVLLKSLVPEFQLEPMVEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-81 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-82 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | YP_001251589.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 3e-81 | 41 |
