Gene Information

Name : rpmF (OTBS_0451)
Accession : YP_001248356.1
Strain : Orientia tsutsugamushi Boryong
Genome accession: NC_009488
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L32
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0333
EC number : -
Position : 427452 - 427658 bp
Length : 207 bp
Strand : -
Note : some L32 proteins have zinc finger motifs consisting of CXXC while others do not

DNA sequence :
ATGGCAGTACCTAAAAAAAGAACTTCTGCATCTAAGACAAGAATGCGCAGATCACACCATGCATTAGCTAAGGTAAATGT
TATCACAGATGCAAAAACAGGAGAATATAGACTCTCGCACCATGTATGTATGACTCATGGAACTTATAATGGGAAGAAAG
TTATTACGGATAATGTCAATACAAACGATAATAATAACAATCCTTAA

Protein sequence :
MAVPKKRTSASKTRMRRSHHALAKVNVITDAKTGEYRLSHHVCMTHGTYNGKKVITDNVNTNDNNNNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpmF NP_814351.1 50S ribosomal protein L32 Not tested Not named Protein 1e-08 51
ef0104 AAM75307.1 EF0104 Not tested Not named Protein 8e-09 51
rpmF NP_814315.1 50S ribosomal protein L32 Not tested Not named Protein 1e-07 50
ef0071 AAM75276.1 EF0071 Not tested Not named Protein 8e-08 50