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Name : serS (OTBS_1037) Accession : YP_001248670.1 Strain : Orientia tsutsugamushi Boryong Genome accession: NC_009488 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1026982 - 1028271 bp Length : 1290 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTGGACATAAAATGGATTAGAGCAAACCCAGATAAACTTGATGAATCACTAAGCAAACGAGGAATTGATTCAGTATC TAAATCAATAATACATATTGATTCAGAAAAAAGAACATTAATATCTCTAATTCAGAAATTACAGCATGAAAGAAAAGAAA AATCTAACAGTGTAGCACATATTTATGACAAATCAAGTACTGATTTTGAAGAAATACAAAACGATGTTAAGCTGATCAAT CAAAAGATAACTGAATTAGAAACTTCATTATTGCATCATGAAAAAAGGTTATCTGAGATTATGGATAACCTTCCTAATTT AGTAGCTGATGATGTACCCTATGGTACCAATAGTGATATGAATAAAGTGCTTAAAGAATGTGGCACAATTCAAAATATCA AATTCCCTAAACATCATTATGAAATTGGAAAAAATTTAGGAATGATCGATTTTAATACAGCTACTAAGATGTCAGGCAGT AGGTTTGTAATTTTAAAACATGATCTTGCGAAACTTGAAAGAGCTTTAATCAATTTTATGATTGATGTACATACTACTGA GTTTAATTTTTTTGAAGTTTCTCCGCCATGCTTAGTTAAGGACCATGCTATGTATAATGTTGGCCAACTACCTAAATTTG CTGATGCATCATTTGAGACTACAACTGGATATAGATTGATACCTACTGCAGAAGTGCCATTAACGAATATTTTTGCTAAT ACTACTTTATTAGAAGAAAAATTACCAATAAGATTGGTAGCGTTTACTCCTTGCTTTAGATCAGAAGTAGGAAGCGCTGG CAAAGACGTTAAAGGTATGTTGCGAATGCATCAATTTGGTAAAGTAGAACTTTTTACTATCGCTACACCTGAAGAATCAA ATAGAGAATTTGAGTATCTTACTACTGCTGCTGAAACAATTCTAAAAAAATTATGTTTACCATATAGAGTAGTGTTATTA TGTAGCGGGGATATAGGATTTGCAGCTCATAAAACATATGATCTTGAAGTGTGGTTACCAGCACAAAATTGTTATAGAGA AATTTCAAGCTGTTCACATTTTAGTTCTTTTCAAGCTAGAAGATCACTAAGTAAATATAGAGAACTTTGCTCTAAAAAAG TTAATTTTCTACATACAATCAATGGATCTGGACTTGCTGTTGGCAGAACTATAATTGCTATTCTAGAAAATTATCAAAAT CCAGATGGATCAGTTACCATTCCTGAAAAGCTTAGGAATTACATGGGAGGGCAGAAACTGATTACACCTTTAACAGAAAC AGTATTTTGA Protein sequence : MLDIKWIRANPDKLDESLSKRGIDSVSKSIIHIDSEKRTLISLIQKLQHERKEKSNSVAHIYDKSSTDFEEIQNDVKLIN QKITELETSLLHHEKRLSEIMDNLPNLVADDVPYGTNSDMNKVLKECGTIQNIKFPKHHYEIGKNLGMIDFNTATKMSGS RFVILKHDLAKLERALINFMIDVHTTEFNFFEVSPPCLVKDHAMYNVGQLPKFADASFETTTGYRLIPTAEVPLTNIFAN TTLLEEKLPIRLVAFTPCFRSEVGSAGKDVKGMLRMHQFGKVELFTIATPEESNREFEYLTTAAETILKKLCLPYRVVLL CSGDIGFAAHKTYDLEVWLPAQNCYREISSCSHFSSFQARRSLSKYRELCSKKVNFLHTINGSGLAVGRTIIAILENYQN PDGSVTIPEKLRNYMGGQKLITPLTETVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-93 | 47 |
