Gene Information

Name : SaurJH9_0447 (SaurJH9_0447)
Accession : YP_001245828.1
Strain : Staphylococcus aureus JH9
Genome accession: NC_009487
Putative virulence/resistance : Virulence
Product : superantigen-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 478315 - 479385 bp
Length : 1071 bp
Strand : +
Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation

DNA sequence :
ATGAATATGAAAACAATTGCTAAAACCAGTTTAGCACTAGGGCTTTTAACAACAGGCGCAATTACAGTAACGACGCAATC
GGTCAAAGCAGAAAAAATACAATCAACTAAAGTTGACAAAGTACCAACGCTTAAAGCAGAGCGATTAGCAATGATAAACA
TAACAGCAGGTGCAAATTCAGCGACAACACAAGCAGCTAACACAAGACAAGAACGCACGCCTAAACTCGAAAAGGCACCA
AATACTAATGAGGAAAAAACCTCAGCTTCCAAAATAGAAAAAATATCACAACCTAAACAAGAAGAGCAGAAATCGCTTAA
TATATCAGCAATGCCAGCGCCTAAACAAGAACAATCACAAACGACAACCGAATCCACAACGCCGAAAACTAAAGTGACAA
CACCTCCATCAACAAACACGCCACAACCAATGCAATCTACTAAATCAGACACACCACAATCTCCAACCATAAAACAAGCA
CAAACAGATATGACTCCTAAATATGAAGATTTAAGAGCGTATTACACGAAACCGAGTTTTGAATTTGAAAAGCAGTTTGG
ATTTTTGCTCAAACCATGGACGACGGTTAGGTTTATGAATGTTATTCCAAATAGGTTCATCTATAAAATAGCTTTAGTTG
GAAAAGATGAGAAAAAATATAAAGATGGACCTTACGATAATATCGATGTATTTATCGTTTTAGAAGACAATAAATATCAA
TTAAAAAAATATTCTGTCGGTGGCATCACGAAGACTAATAGTAAAAAAGTTGATCACAAAGCAGAATTAAGCGTTACTAA
AAAAGATAATCAAGGTATGATTTCACGCGATGTTTCAGAATACATGATTACTAAGGAAGAGATTTCCTTGAAAGAGCTTG
ATTTTAAATTGAGAAAACAACTTATTGAAAAACATAATCTTTACGGTAACATGGGTTCAGGAACAATCGTTATTAAAATG
AAAAACGGTGGGAAGTATACGTTTGAATTACACAAAAAACTGCAAGAGCATCGTATGGCAGATGTCATAGAAGGTACAAA
CATTGATAAAATTGAAGTGAATATAAAATAA

Protein sequence :
MNMKTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQERTPKLEKAP
NTNEEKTSASKIEKISQPKQEEQKSLNISAMPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQA
QTDMTPKYEDLRAYYTKPSFEFEKQFGFLLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ
LKKYSVGGITKTNSKKVDHKAELSVTKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNMGSGTIVIKM
KNGGKYTFELHKKLQEHRMADVIEGTNIDKIEVNIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
set8 NP_370948.1 superantigen-like protein Virulence vSa¥á Protein 5e-139 99
set8 NP_373634.1 superantigen-like protein Virulence vSa¥á Protein 5e-139 99
SACOL0470 YP_185360.1 superantigen-like protein Virulence vSa¥á Protein 8e-134 97
set3nm YP_001331424.1 superantigen-like protein Virulence vSa¥á Protein 8e-134 97
SAUSA300_0397 YP_493111.1 superantigen-like protein Virulence vSa¥á Protein 8e-134 97
SAS0386 YP_042511.1 superantigen-like protein Virulence vSa¥á Protein 5e-138 97
set18 NP_645201.1 superantigen-like protein Virulence vSa¥á Protein 5e-138 97
SAKOR_00406 YP_008490590.1 Exotoxin Virulence vSa¥á Protein 7e-135 95
SAMSHR1132_03740 YP_005324896.1 exotoxin Virulence vSa¥á Protein 3e-87 62
SAR0424 YP_039876.1 superantigen-like protein Virulence vSa¥á Protein 6e-84 55