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Name : SaurJH9_0042 (SaurJH9_0042) Accession : YP_001245430.1 Strain : Staphylococcus aureus JH9 Genome accession: NC_009487 Putative virulence/resistance : Unknown Product : phage integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 51850 - 53742 bp Length : 1893 bp Strand : - Note : PFAM: phage integrase family protein DNA sequence : ATGAATGCTTCTAGTAAAAGGAAAATTATTAGTCAGAGTGAGATTAGCAAAAAAATAGCTGTAATGAATGAAGAAATGCA GGGGTTTTGGGCTAATAATAGTTGGGATATAAGAAAATGTCCACATCCTTCTGCCATAGAATTAAGTAAGAATCCTGCTT TAAGGAATCGTTGGGTTCGTTTTGAACGTGTTAAAAATCTGTGGTTAAGAACAGAATTGAAATATTTTTATTTTTACCAT TTAAACAATGGAATATGGAATGCAAAAACTGTCTGGATTAGAAAAGGAACAGTAATTAATAAAATGTTAGATTTCTTAGA TTTAAAGTATCCTAGCATTACTTCAATTACTGAAGTTCCTATTGAAAAAGCAATGACGGAGTATAGAACTTATTTGACAA AACGGGGTGTTAGAATTACCACTACTAATTATAAGATTACTGCTAATCAAGAAAAAACACCTGTAAAAGCTAATTCCTAC TATGTTACTAATCTAAAACAATTTATGGAGTTTTATGAGAACTTTTATTTTGATGGAGAGGAGTGGGATAAAGACGTTTG GGATAGACGTAACTTACCTTTGCCAGATGATAAGGTTAACCCAACACAATATGAATATACAATTAACTTTAAAGGGTTTC GGAATACATATTTTAAACAACTTGTAAAAAGATATTGTAAGTTGAGATTGAACGTGGATAGCTTTTCCTATGTAAGTGAT ATTGCCCAAAGACTTAAAGAGTTCTTTAATTTTCTGGACATGAAATTTAAACAAGTTCAGAGAGTACACCAATTAACGAG AGTGGAAATTGAAGCATATTTAAGTGAACTAAACATGATGGGAATAAAACCTAGTACAATAACTGGGAGGATCTCTATAT TGGAAGGACTATTTAGTACCCTTCTTAGGCTAGAATGGGATGATGTTCCTTCCAAAATATTAATTTATTCTGAGGACTAT CCGAAAATACCAAGAGCAAAACCACGCTTTATAGATGAATTCGTCCTAGAGCAATTGAACAGTCATCTTGATAAATTACC CGAATATATAGCTACGATGACTATGATTGTTCAAGAATGTGGAATGAGGATAAGTGAATTGTGCACCTTGAAAAAAGGCT GTCTATTAGAGGACAAAGATGGAGATTTCTTTTTAAAGTATTATCAATGGAAAATGAAAAAGGAGCATATAGTTCCAATA TCTAAAGAGGTAGCTTTACTTATTAAAGTTCGGGAAGATAAAGTTTCAGAGGAATTTCCAGATAGTGAATACCTCTTTCC AAGAAAAGATGGATCGCCATTAAAACAAGAAACATTTAGAGGTGAGTTAAATAAATTAGCTTATGAGCAAAATATAGTGG ATAAATCAGGTGAGATTTATAGATTCCATGCCCATGCCTTTCGCCATACAGTAGGAACAAGAATGATTAACAACGGGATG CCCCAGCATATTGTGCAGAAATTTTTGGGGCATGAAAGCCCAGAAATGACAAGCAGATACGCTCATATCTTTGATGAAAC TCTAAAAAATGAATTTACTAAATTTCAGGAAAAACTGGTTACCAATAATGGAGATGTGCTTGATCTAGATGAAGATAATG AAGTCGATGATGTAGAGCTTCAATGGTTCAAGAAAAATATAAATGCACAAGTGCTTCCAAATGGTTATTGTAGATTGCCA GTAGTAGCAGGTGGTTGTCCACATGCGAATGCATGCTTAGATTGCACTCACTTCTGTACCAGTAAGCAATTCTTACCACA GCACGAAGAACAGTTAGAGCGTACAGAAGAGTTATTAGCCATAGCTAAGGATAAACAATGGCAAAGACAAGTAGAGACTA ATAGCCGTGTTAAAGAGCGTTTAGAACAAATCATTGGAAGTTTGACGGGGTAA Protein sequence : MNASSKRKIISQSEISKKIAVMNEEMQGFWANNSWDIRKCPHPSAIELSKNPALRNRWVRFERVKNLWLRTELKYFYFYH LNNGIWNAKTVWIRKGTVINKMLDFLDLKYPSITSITEVPIEKAMTEYRTYLTKRGVRITTTNYKITANQEKTPVKANSY YVTNLKQFMEFYENFYFDGEEWDKDVWDRRNLPLPDDKVNPTQYEYTINFKGFRNTYFKQLVKRYCKLRLNVDSFSYVSD IAQRLKEFFNFLDMKFKQVQRVHQLTRVEIEAYLSELNMMGIKPSTITGRISILEGLFSTLLRLEWDDVPSKILIYSEDY PKIPRAKPRFIDEFVLEQLNSHLDKLPEYIATMTMIVQECGMRISELCTLKKGCLLEDKDGDFFLKYYQWKMKKEHIVPI SKEVALLIKVREDKVSEEFPDSEYLFPRKDGSPLKQETFRGELNKLAYEQNIVDKSGEIYRFHAHAFRHTVGTRMINNGM PQHIVQKFLGHESPEMTSRYAHIFDETLKNEFTKFQEKLVTNNGDVLDLDEDNEVDDVELQWFKKNINAQVLPNGYCRLP VVAGGCPHANACLDCTHFCTSKQFLPQHEEQLERTEELLAIAKDKQWQRQVETNSRVKERLEQIIGSLTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | BAB47666.1 | transposase B(Tn554) | Not tested | Type-III SCCmec | Protein | 0.0 | 100 |
| tnpB | BAC53828.1 | transposase B(Tn554) | Not tested | SRImec-III and SCCmec-III region | Protein | 0.0 | 100 |
| tnpB1 | YP_039525.1 | transposase B 1 | Not tested | Type-II SCCmec | Protein | 0.0 | 100 |
| tnpB | BAA82202.1 | transposaseB | Not tested | Type-II SCCmec | Protein | 0.0 | 100 |
| tnpB | NP_370579.1 | transposase B | Not tested | Type-II SCCmec | Protein | 0.0 | 100 |
| tnpB | NP_373291.1 | transposase B for Tn554 | Not tested | Type-II SCCmec | Protein | 0.0 | 100 |
| tnpB-3 | YP_190049.1 | transposase B | Not tested | Type-II SCCmec | Protein | 0.0 | 100 |
| tnpB | BAC57490.1 | transposaseB | Not tested | Type-IIIinv SCCmec | Protein | 0.0 | 99 |
| tnpB | BAC57471.1 | transposase B | Not tested | Type-IIIinv SCCmec | Protein | 0.0 | 99 |
| unnamed | BAB47606.1 | transposase B of Transposon Tn554 | Not tested | Type-III SCCmec | Protein | 0.0 | 97 |
