Gene Information

Name : SaurJH9_2008 (SaurJH9_2008)
Accession : YP_001247368.1
Strain : Staphylococcus aureus JH9
Genome accession: NC_009487
Putative virulence/resistance : Unknown
Product : phage minor structural protein
Function : -
COG functional category : :
COG ID : COG5185
EC number : -
Position : 2135795 - 2139580 bp
Length : 3786 bp
Strand : -
Note : TIGRFAM: phage minor structural protein

DNA sequence :
GTGATACATGTTTTAGATTTTAACGACAAGATTATAGATTTCCTTTCTACTGATGACCCTTCCTTAGTTAGAGCGATTCA
TAAACGTAATGTTAATGACAATTCAGAAATGCTTGAACTGCTCATATCATCAGAAAGAGCTGAAAAGTTCCGTGAACGAC
ATCGTGTTATTATAAGGGATTCAAACAAACAATGGCGTGAATTTATTATTAACTGGGTTCAAGATACGATGGACGGCTAC
ACAGAGATAGAATGTATAGCGTCTTATCTTGCTGATATAACAACAGCTAAACCGTATGCACCAGGCAAATTTGAGAAAAA
GACAACTTCAGAAGCATTGAAAGATGTGTTGAGCGATACAGGTTGGGAAGTTTCTGAACAAACCGAATACGATGGCTTAC
GTACTACGTCATGGACTTCTTATCAAACTAGATATGAAGTTTTAAAGCAATTATGTACAACCTATAAAATGGTATTGGAT
TTTTATATAGAGCTTAGTTCTAATACCGTCAAAGGTAGATATGTGGTACTCAAAAAGAAAAACAGCTTATTCAAAGGTAA
AGAAATTGAGTATGGTAAAGATTTGGTTGGGTTAACTAGGAAGATTGATATGTCAGAAATCAAAACAGCATTAATTGCTG
TGGGACCTGAAAATGACAAAGGGAAGCGTTTAGAGCTAGTTGTGACAGATGACGAAGCGCAAAGTCAATTCAACCTACCT
ATGCGCTATATTTGGGGGATATATGAACCACAATCAGATGATCAAAATATGAATGAAACACGATTAAGTTCTTTAGCCAA
AACAGAGTTAAATAAACGTAAGTCGGCAGTTATGTCATATGAGATTACTTCTACTGATTTGGAAGTTACGTATCCGCACG
AGATTATATCAATTGGCGATACAGTCAGAGTAAAACATAGAGATTTTAACCCGCCATTGTATGTAGAGGCAGAAGTTATT
GCTGAAGAATATAACATAATTTCAGAAAATAGCACATATACATTCGGTCAACCTAAAGAGTTCAAAGAATCAGAATTACG
AGAAGAGTTTAACAAGCGATTAAACCTAATACACCAAAAATTAAACGACAATATTAGCAATATCAACACTATAGTTAAAG
ATGTTGTAGATGGTGAATTAGAATACTTTGAACGCAAAATACACAAAAGTGATACACCGCCAGAAAATCCAGTCAATGAT
ATGCTTTGGTATGATACAAGTAACCCTGATGTTGCTGTCTTGCGTAGATATTGGAATGGTCGATGGATTGAAGCAACACC
AAATGATGTTGAAAAATTAGGTGGTATAACAAGAGAGAAAGCGCTATTCAGTGAATTAAACAATATTTTTATTAATTTAT
CTATACAACACGCTAGTCTTTTGTCAGAAGCTACAGAATTACTGAATAGCGAGTACTTAGTAGATAATGATTTGAAAGCG
GACTTACAAGCAAGTTTAGACGCTGTGATTGATGTTTATAATCAAATTAAAAATAATTTAGAATCTATGACACCCGAAAC
TGCAACGATTGGTCGGTTGGTAGATACACAAGCTTTATTTCTTGAGTATAGAAAGAAATTACAAGATGTTTATACAGATG
TAGAAGATGTCAAAATCGCCATTTCAGATAGATTTAAATTATTACAGTCACAATACACTGATGAAAAATATAAAGAAGCG
TTGGAAATAATAGCAACAAAATTTGGTTTAACGGTGAATGAAGATTTGCAGTTAGTCGGAGAACCTAATGTTGTTAAATC
AGCTATTGAAGCAGCTAGAGAATCCACAAAAGAACAATTACGTGACTATGTAAAAACATCGGACTATAAAACAGACAAAG
ACGGTATTGTTGAACGTTTAGATACTGCTGAAGCTGAGAGAACGACTTTAAAAGGTGAAATCAAAGATAAAGTTACGTTA
AACGAATATCGAAACGGATTGGAAGAACAAAAACAATATACTGATGACCAGTTAAGTGATTTGTCCAATAATCCTGAGAT
TAAAGCAAGTATTGAACAAGCAAATCAAGAAGCGCAAGAAGCTTTAAAATCATACATTGATGCTCAAGATAATCTTAAAG
AGAAGGAATCGCAAGCGTATGCTGATGGTAAAATTTCGGAAGAAGAGCAACGCGCTATACAAGATGCTCAAGCTAAACTT
GAAGAGGCAAAACAAAACGCAGAACTAAAGGCTAGAAACGCTGAAAAGAAAGCTAATGCTTATACAGACAACAAGGTCAA
AGAAAGCACAGATGCACAGAGGAGAACACTGACTCGCTATGGTTCTCAAATTATACAAAATGGTAAGGAAATCAAATTAA
GAACTACTAAAGAAGAGTTTAATGCAACCAATCGTACACTTTCAAATATATTAAACGAGATTGTCCAAAACGTTACAGAT
GGAACAACAATCAGATATGATGATAACGGAGTGGCTCAAGCTTTAAATGTGGGGCCACGTGGTATTAGATTAAATGCTGA
TAAAATTGATATTAACGGTAATAGAGAAATAAACCTTCTTATCCAAAATATGCGAGATAAAGTAGATAAAACCGATATTG
TCAACAGCCTTAATTTATCAAGAGAGGGTCTTGATATCAATGTTAATAGAATTGGAATTAAAGGCGGTAACAATAACAGA
TATGTTCAAATACAGAATGATTCTATTGAACTAGGTGGTATTGTGCAACGAACTTGGAAAGGCAAACGATCAACCGATGA
TATATTCACACGTCTTAAAGATGGACATCTAAGGTTTAGAAATAACACCGCTGGCGGTTCACTTTATATGTCACATTTTG
GTATTTCAACATATATTGATGGAGAAGGCGAAGACGGAGGTTCATCCGGTACTATTCAATGGTGGGATAAAACTTACAGT
GATAGCGGTATGAATGGCATAACAATCAATTCCTATGGTGGTGTCGTTGCACTAACGTCAGATAATAATCGGGTTGTTCT
GGAGTCTTACGCTTCATCGAATATCAAAAGCAAACAGGCACCGGTGTATTTATATCCAAACACAGACAAAGTGCCTGGAT
TAAACCGATTTGCATTCACGCTGTCTAATGCAGATAATGCTTATTCGAGTGACGGTTATATTATGTTTGGTTCTGATGAG
AACTATGATTACGGTGCGGGTATCAGGTTTTCTAAAGAAAGAAATAAAGGTCTTGTTCAAATTGTTAATGGACGATATGC
AACAGGTGGAGATACAACAATCGAAGCAGGGTATGGCAAATTTAATATGCTGAAACGACGTGATGGTAATAGGTATATTC
ATATACAGAGTACAGACCTACTGTCTGTAGGTTCAGATGATGCAGGAGATAGGATAGCTTCTAACTCAATTTATAGACGT
ACTTATTCGGCCGCAGCTAATTTGCATATTACTTCTGCTGGCACAATTGGGCGTTCGACATCAGCGCGTAAATACAAGTT
ATCTATCGAAAATCAATATAACGATAGAGATGAACAACTGGAACATTCAAAAGCTATTCTTAACTTACCTATTAGAACGT
GGTTTGATAAAGCTGAGTCTGAAATTTTAGCTAGAGAGCTGAGAGAAGATAGAAAATTATCGGAAGACACCTATAAACTT
GATAGATACGTAGGTTTGATTGCTGAAGAGGTGGAGAATTTAGGATTAAAAGAGTTTGTCACGTATGATGACAAAGGAGA
AATTGAAGGTATAGCGTATGATCGTCTATGGATTCATCTTATCCCTGTTATCAAAGAACAACAACTAAGAATCAAGAAAT
TGGAGGAGTCAAAGAATGCAGGATAA

Protein sequence :
MIHVLDFNDKIIDFLSTDDPSLVRAIHKRNVNDNSEMLELLISSERAEKFRERHRVIIRDSNKQWREFIINWVQDTMDGY
TEIECIASYLADITTAKPYAPGKFEKKTTSEALKDVLSDTGWEVSEQTEYDGLRTTSWTSYQTRYEVLKQLCTTYKMVLD
FYIELSSNTVKGRYVVLKKKNSLFKGKEIEYGKDLVGLTRKIDMSEIKTALIAVGPENDKGKRLELVVTDDEAQSQFNLP
MRYIWGIYEPQSDDQNMNETRLSSLAKTELNKRKSAVMSYEITSTDLEVTYPHEIISIGDTVRVKHRDFNPPLYVEAEVI
AEEYNIISENSTYTFGQPKEFKESELREEFNKRLNLIHQKLNDNISNINTIVKDVVDGELEYFERKIHKSDTPPENPVND
MLWYDTSNPDVAVLRRYWNGRWIEATPNDVEKLGGITREKALFSELNNIFINLSIQHASLLSEATELLNSEYLVDNDLKA
DLQASLDAVIDVYNQIKNNLESMTPETATIGRLVDTQALFLEYRKKLQDVYTDVEDVKIAISDRFKLLQSQYTDEKYKEA
LEIIATKFGLTVNEDLQLVGEPNVVKSAIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTAEAERTTLKGEIKDKVTL
NEYRNGLEEQKQYTDDQLSDLSNNPEIKASIEQANQEAQEALKSYIDAQDNLKEKESQAYADGKISEEEQRAIQDAQAKL
EEAKQNAELKARNAEKKANAYTDNKVKESTDAQRRTLTRYGSQIIQNGKEIKLRTTKEEFNATNRTLSNILNEIVQNVTD
GTTIRYDDNGVAQALNVGPRGIRLNADKIDINGNREINLLIQNMRDKVDKTDIVNSLNLSREGLDINVNRIGIKGGNNNR
YVQIQNDSIELGGIVQRTWKGKRSTDDIFTRLKDGHLRFRNNTAGGSLYMSHFGISTYIDGEGEDGGSSGTIQWWDKTYS
DSGMNGITINSYGGVVALTSDNNRVVLESYASSNIKSKQAPVYLYPNTDKVPGLNRFAFTLSNADNAYSSDGYIMFGSDE
NYDYGAGIRFSKERNKGLVQIVNGRYATGGDTTIEAGYGKFNMLKRRDGNRYIHIQSTDLLSVGSDDAGDRIASNSIYRR
TYSAAANLHITSAGTIGRSTSARKYKLSIENQYNDRDEQLEHSKAILNLPIRTWFDKAESEILARELREDRKLSEDTYKL
DRYVGLIAEEVENLGLKEFVTYDDKGEIEGIAYDRLWIHLIPVIKEQQLRIKKLEESKNAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1928 YP_494579.1 phi77 ORF002-like protein, phage minor structural protein Not tested ¥ÕSa3 Protein 0.0 99
SAOV_1117 YP_005736612.1 Structural protein, phage associated Not tested ¥ÕSa2 Protein 0.0 99
SAOV_1916c YP_005737361.1 Structural protein, phage associated Not tested ¥ÕSa3 Protein 0.0 99
SAKOR_01930 YP_008492118.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 99
SAUSA300_1928 YP_494579.1 phi77 ORF002-like protein, phage minor structural protein Not tested ¥ÕSa3 Protein 0.0 99
MW1893 NP_646710.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 94
SAV1953 NP_372477.1 phi PVL ORF 20 and 21-like protein Not tested ¥ÕSa3 Protein 0.0 94
SA1764 NP_375062.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 91