Gene Information

Name : SaurJH9_2004 (SaurJH9_2004)
Accession : YP_001247364.1
Strain : Staphylococcus aureus JH9
Genome accession: NC_009487
Putative virulence/resistance : Virulence
Product : phage phi LC3 family holin
Function : -
COG functional category : S : Function unknown
COG ID : COG5546
EC number : -
Position : 2134173 - 2134427 bp
Length : 255 bp
Strand : -
Note : TIGRFAM: holin, phage phi LC3 family; PFAM: Holin, phage phi LC3

DNA sequence :
ATGATTAATTGGAAAATTAGAATGAAACAAAAATCATTTTGGGTAGCGATATTGTCAGCTATCTTTTTATTTGCTCAAAA
CATCGCAAAAGCTATTGGGTATGATATCCAAGTTTATACAGAGCAATTAACAGACGGTTTAAACGCTATATTAGGATTTT
TAGTATTAACTGGTGTGATTCAAGACCCGACTACTAAAGGTATAGGTGATAGCCACCAAGCTTTAGAATATGAAGAACCA
AGAAGAAAATACTAG

Protein sequence :
MINWKIRMKQKSFWVAILSAIFLFAQNIAKAIGYDIQVYTEQLTDGLNAILGFLVLTGVIQDPTTKGIGDSHQALEYEEP
RRKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1887 NP_646704.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-34 100
SAV1946 NP_372470.1 holin-like protein Not tested ¥ÕSa3 Protein 1e-34 100
SA1760 NP_375055.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-34 100
SAUSA300_1924 YP_494575.1 holin Virulence ¥ÕSa3 Protein 1e-34 100
SAUSA300_1924 YP_494575.1 holin Virulence ¥ÕSa3 Protein 1e-34 100
SAKOR_01925 YP_008492113.1 Holin Virulence ¥ÕSa3 Protein 1e-34 100
SAOV_1911 YP_005737356.1 phage-associated holin Not tested ¥ÕSa3 Protein 2e-30 99
SEQ_2040 YP_002747255.1 phage holin Not tested ¥ÕSeq4 Protein 2e-06 46