Gene Information

Name : Tpet_0726 (Tpet_0726)
Accession : YP_001244322.1
Strain : Thermotoga petrophila RKU-1
Genome accession: NC_009486
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 730381 - 732843 bp
Length : 2463 bp
Strand : -
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase

DNA sequence :
ATGTTTGATAAGTTCTCGGAGAAGACAGCTCAGATATTTGTAACAGCCCAGGAGGAGGCAAAAGAACTCGGGCATTCGTA
CGTCGGAACGGAGCACCTTCTGCTTGCAATTCTAAAAGTAGATAGAAGCCCGGCCGTCGAACTCCTGGAAGAAATGGGAG
CCTCGTACTCCAAGGTGAGATCCGAGATCATCTCCATGGTTGGCATGGGGATGAGAGGCTTTGTCCCTTCTCCTCAGATG
ACTCCAAGAGCCAAAAGAGTGACCGAACTCGCATACGAAGAGGCGAAGATTCTTGGAAGTGACAAGATAAACCCGGAGCA
TCTTCTCCTTGGTATTCTGAGAGAGGGAGAAGGGATTGCAATACACATTCTGAGGAAACTTGGAGTAGATATCGCCACTC
TGAGAAGAGAGATCATTGATATCTACTCTTACTCCTCGAACAAAAGCCTGGAGTACGAAGAAGAAGAGGATTACACTTAC
AGAAGTGTGAAACAACTTGAAGGCTTCGGTGTGAACCTCACGGAACTTGCAGCTAAGAAAGAACTCGACCCAGTTATTGG
AAGAGAAGAAGAAATAGAGAGGGTGATGCAGGTTCTTGTCAGGAGGAAGAAAAACAATCCTGTCCTCATAGGAGATCCTG
GGGTTGGAAAAACAGCGATAGTTGAAGGTCTGGCCCAGAGGATTGTTGCCGGAGATGTGCCCGAGATCTTGAAAAACAAA
GTGATCTTCTCTCTTGATGTGGCAGCGCTGGTTGCGGGAACCAAGTACAGAGGTGAATTCGAAAAGAGGATGAAAAAGCT
CCTTCAGATAGTGACCAAGGATAAGAACATCATCCTCTTCATAGACGAGATACACACCATAGTGGGTGCTGGATCGGCTG
AGGGAGCGATCGATGCTGCGAACATTTTAAAGCCCGCTCTCGCACGTGGGGAGATAAGCTGTATAGGTGCCACTACACCG
GACGAATACAGGAAGTACATTGAAAAGGATGCAGCTCTGGAGAGAAGGTTTCAGAAGATATACGTGAAAGAACCAACCGA
GGAAGAGACGCTTGAAATACTGAAAGGTTTGAAGAGAAAATACGAGTCGCATCATAAGGTGATTTATACCGACAAGGCTC
TGGAGGCGGCCGTTTATCTTTCCAAGAGATACATAACTGACCACTATCTACCGGACAAGGCGATCGATGTGATAGACGAG
GCAGGTGCCAGAGCGAGATTGAAGGTATTTGTGCTTCCTCCAGAACTGAAGAGTATGAAATTAGAACTGGAAAGGATAAG
AAGTGATAAGGAGCTCGCTGTTCTGAACCAGGATTACGAAAAAGCGGCCCAACTGAAAGAAGAGGAAATGGAGCTGGAAG
CGGAATATAGAAAGAGGTACGCGGAATGGAGAAGACACGCGGAAACGGCCGTAGTGAGGGTAGACGTGGATGACGTGGCC
GAGGTGGTGTCTTCCTGGACGGGCGTTCCTCTCAAAAAGATCGAAGAAACGGAAGTCGAAAAGCTTCTCAATCTCGAAGA
GGCTCTCCACCAGAGAATCGTTGCTCAGGACGAAGCCATAAAAGCTGTAGCCAGGGCCATAAGAAGAGCAAGAAGTGGTT
TGAAGGATCCAAGAAGGCCGATAGGTGTGTTCCTGTTCCTCGGTCCAACGGGTGTTGGAAAGACAGAGCTTGCAAAGGCG
CTCGCAGAGTACCTGTTCGGGGATGAAAGGGCCCTCATCAGGTTCGACATGAGCGAATACATGGAGAGGTTCTCCGTTTC
AAGGCTCATAGGAGCACCTCCAGGGTACGTGGGTTACGAAGAAGGCGGTACTCTCACGGAGAAAGTGAGAAGAAGACCGT
TCTCGGTGATCCTGTTCGACGAAATAGAGAAGGCACATCCGGACGTGTTCAACATACTGCTTCAGATAATGGACGATGGA
AGACTCACGGATTCTCAGGGACGTGAAGTTGATTTCAGGAACACGATCATCATCATGACCAGTAACATTGGAAGCTCTTA
CATCAACAAGTCCAAGAGAACACTCGGGTTTGTAGGTGACAACAACGAAGAGAAGGAATTCGAGAAAATAAAGGATCTCG
TTCTGGAAGAGGTGAAAAGAACGTTCAGACCGGAGTTCCTGAACAGGATCGATGAAACGATCATCTTCCATCCGTTGAAT
AAAGAACACATCGAACAGATCATCGATATACTCTTGAGAGATCTAAGGAAGAGACTCTCGGAGAAGAACATGAAGCTTGT
ACTGACAAAGAGTGCAAAGGAGTTCTTGGTTGAAAAGGGATTCGATCCGGTTTACGGAGCAAGACCTCTGAAGAGAGCGA
TACAGAGATACGTGGAAGATCCTCTCTCTGAAGAGATCCTGAGAGGTAAGTTCAACGAAGGAGATACGATCGTCTGTAGG
GCTCGCAAAGATGCTCTTCGATTCACCAGAAAGGGTGAAAAGAAGGAGAAGGTGGTCCAGTGA

Protein sequence :
MFDKFSEKTAQIFVTAQEEAKELGHSYVGTEHLLLAILKVDRSPAVELLEEMGASYSKVRSEIISMVGMGMRGFVPSPQM
TPRAKRVTELAYEEAKILGSDKINPEHLLLGILREGEGIAIHILRKLGVDIATLRREIIDIYSYSSNKSLEYEEEEDYTY
RSVKQLEGFGVNLTELAAKKELDPVIGREEEIERVMQVLVRRKKNNPVLIGDPGVGKTAIVEGLAQRIVAGDVPEILKNK
VIFSLDVAALVAGTKYRGEFEKRMKKLLQIVTKDKNIILFIDEIHTIVGAGSAEGAIDAANILKPALARGEISCIGATTP
DEYRKYIEKDAALERRFQKIYVKEPTEEETLEILKGLKRKYESHHKVIYTDKALEAAVYLSKRYITDHYLPDKAIDVIDE
AGARARLKVFVLPPELKSMKLELERIRSDKELAVLNQDYEKAAQLKEEEMELEAEYRKRYAEWRRHAETAVVRVDVDDVA
EVVSSWTGVPLKKIEETEVEKLLNLEEALHQRIVAQDEAIKAVARAIRRARSGLKDPRRPIGVFLFLGPTGVGKTELAKA
LAEYLFGDERALIRFDMSEYMERFSVSRLIGAPPGYVGYEEGGTLTEKVRRRPFSVILFDEIEKAHPDVFNILLQIMDDG
RLTDSQGREVDFRNTIIIMTSNIGSSYINKSKRTLGFVGDNNEEKEFEKIKDLVLEEVKRTFRPEFLNRIDETIIFHPLN
KEHIEQIIDILLRDLRKRLSEKNMKLVLTKSAKEFLVEKGFDPVYGARPLKRAIQRYVEDPLSEEILRGKFNEGDTIVCR
ARKDALRFTRKGEKKEKVVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpet_0726 YP_001244322.1 ATPase VFG0079 Protein 0.0 55
Tpet_0726 YP_001244322.1 ATPase VFG0080 Protein 5e-138 53