|
Name : Tpet_0719 (Tpet_0719) Accession : YP_001244315.1 Strain : Thermotoga petrophila RKU-1 Genome accession: NC_009486 Putative virulence/resistance : Unknown Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 721502 - 723841 bp Length : 2340 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : TTGTGTTCCAGATACTTTACATCCTCTCTTTCCTTGTGGGGTGAAGCGTTGCCGATACTGTTAGAAGAATTCCTCAACGA AGTCGAGAAAATGCTCAAAAATCAGGTGAACACACGGAGAATTTACCAGCTCCTTCAGGAGCTGGATGATCCTTTACTGG ACAACAAAGACCTCGAAGAGAAACTTCAAGCTTTTCTCGACTACGCGAAAGAAATTCCCAACCTTCCGGAAGTAAGGAAA AGGTACAGAATCCAGAAATCTCTGGAAATGATAGAAAAGCTGAGAAGCTGGTTTCTCATAGACTACTTAGAATGTTCTGG AGAAGAGGTCGATCTCTCAACGGATATCCAGTACGCAAAAGGAGTGGGACCCAACAGAAAAAAGAAACTAAAAAAACTCG GAATAGAAACGCTGAGAGACCTCCTCGAGTTTTTCCCAAGGGATTACGAAGACAGAAGGAAGATCTTCAAACTGAACGAT CTTCTTCCAGGTGAAAAGGTGACAACCCAGGGAAAGATCGTGAGCGTTGAGACAAAAAGATTCCAGAACATGAACATCTT GACTGCCGTTCTGTCTGACGGTTTGGTGCACGTTCTTTTGAAATGGTTCAACCAGGAATACCTCCAGACCTATCTGAAAC AGCTCACCGGAAAAGAAGTTTTCGTGACCGGCACCGTGAAATCGAACGCGTACACGGGCCAGTACGAAATTCACAACGCC GAGGTAACACCGAAAGAGGGGGAATACGCAAGAAGGATACTTCCCATATACCGTTTGACCTCGGGAATTTCACAAAAACA AATGAGAAAGATCTTCGAGGAAAACATCCCATCTCTCTGCTGTTCGTTGAAAGAAACCCTTCCAGAAAGGATTCTTGAGA AGAGAAAACTGCTTGGTGTGAAAGACGCGTACTACGGAATGCACTTTCCCAAAACCTTCTATCACCTCGAAAAGGCCCGG GAGAGGCTTGCCTACGAAGAACTTTTCGTACTTCAGTTGGCTTTCCAGAAGATCAGAAAAGAGCGGGAAAAGCACGGAGG GATTCCAAAGAAAATAGAAGGAAAACTCGCAGAGGAGTTTATAAAGTCCCTTCCCTTCAAGCTGACGAATTCTCAAAAGA GAGCTCATCAGGAGATAAGAAACGATATGATCTCTGAAAAACCGATGAACAGGCTCCTTCAAGGGGATGTGGGCTCTGGA AAGACCGTCGTGGCACAGCTCGCCATACTCGACAACTACGAAGCGGGTTTCCAGACGGCCTTCATGGTGCCAACCTCGAT CCTCGCGATCCAGCACTACAGAAGAACCATCGAGAGTTTTTCGAAATTCAACATCCACGTGGCACTCCTCATAGGAGCAA CCACGCCCTCAGAGAAGGAGAAAATAAAATCCGGCCTCAGGAACGGTCAAATAGACGTGGTGATAGGAACACACGCACTG ATACAGGAAGACGTTCATTTCAAGAACCTGGGACTGGTCATAATCGACGAACAGCACCGCTTCGGTGTGAAACAAAGAGA AGCCCTCATGAACAAGGGAAAGATGGTGGACACACTGGTGATGAGTGCCACTCCCATTCCCAGAAGTATGGCCCTTGCCT TCTACGGGGATCTCGATGTCACAGTGATAGACGAGATGCCTCCTGGAAGAAAAGAAGTGCAGACCATGCTCGTTCCGATG GATAGAGTGAACGAAATCTACGAGTTCGTGAGGCAAGAAGTGATGAAGGGAGGACAGGCTTTCATCGTTTATCCGCTCAT CGAAGAGTCGGACAAACTGAACGTGAAATCCGCTGTGGAGATGTACGAATACCTCTCGAAAGAAGTCTTCCCGGAGTTCA AACTGGGTCTCATGCACGGACGGCTTTCTCAGGAGGAAAAGGACAGAGTCATGTTAGAGTTCGCCGAAGGAAGGTACGAC ATCCTCGTTTCCACAATGGTTATAGAAGTCGGGATAGACGTTCCGAGAGCGAACGTGATGGTGATAGAAAACCCAGAGAG GTTTGGCCTTGCCCAGCTCCACCAGCTTCGTGGAAGAGTGGGAAGGGGAGGTCAGGAGGCTTACTGCTTCCTCGTTGTTG GAGACGTGGGAGAGGAAGCGATGGAAAGGTTGAGATTCTTCACACTCAACACGGATGGCTTCAAAATAGCCGAGTACGAT TTGAAAACGAGGGGCCCTGGAGAGTTCTTCGGTGTGAAACAGCACGGTTTGAGCGGCTTTAAAGTGGCCGATCTATACAG AGATCTGAAGCTCCTGGAATGGGCAAGAGAAGATGTCCAGGAAATCGACGTGGAAGGAATAGAACTCCCGGAAGAGATAA AACTCATCGAAGTAGGCTGA Protein sequence : MCSRYFTSSLSLWGEALPILLEEFLNEVEKMLKNQVNTRRIYQLLQELDDPLLDNKDLEEKLQAFLDYAKEIPNLPEVRK RYRIQKSLEMIEKLRSWFLIDYLECSGEEVDLSTDIQYAKGVGPNRKKKLKKLGIETLRDLLEFFPRDYEDRRKIFKLND LLPGEKVTTQGKIVSVETKRFQNMNILTAVLSDGLVHVLLKWFNQEYLQTYLKQLTGKEVFVTGTVKSNAYTGQYEIHNA EVTPKEGEYARRILPIYRLTSGISQKQMRKIFEENIPSLCCSLKETLPERILEKRKLLGVKDAYYGMHFPKTFYHLEKAR ERLAYEELFVLQLAFQKIRKEREKHGGIPKKIEGKLAEEFIKSLPFKLTNSQKRAHQEIRNDMISEKPMNRLLQGDVGSG KTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTIESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHAL IQEDVHFKNLGLVIIDEQHRFGVKQREALMNKGKMVDTLVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLVPM DRVNEIYEFVRQEVMKGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRYD ILVSTMVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFLVVGDVGEEAMERLRFFTLNTDGFKIAEYD LKTRGPGEFFGVKQHGLSGFKVADLYRDLKLLEWAREDVQEIDVEGIELPEEIKLIEVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-94 | 41 |
