Gene Information

Name : Tpet_0568 (Tpet_0568)
Accession : YP_001244165.1
Strain : Thermotoga petrophila RKU-1
Genome accession: NC_009486
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 566265 - 566969 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAAAAAGGTGATGGAGCTTGTCGATGTGTGGAAAATATATGACCTGGGTGAGGTGAAGGTCGAGGCTCTTCGTGGTGT
TTCTTTCGAGGTGTTCGAAGGAGAATACGTGATCATAATAGGACCATCTGGAAGCGGAAAGTCTACACTCCTTCACATTC
TTGGATGTCTCGATCGTCCTACAAAGGGAAAGGTACTCATAGAAGGAGAAGAGGTTTCGAGGATGGGTGATCGAAGGCTC
GCGCAGGTTAGAAACAGGAAAATAGGCTTTGTCTTTCAGAGTTACAACCTTCTTCCCCGTCTCACCGCTTTGGAAAATGT
GGAGCTTCCAATGATCTACGCGGGTGTACCGGCGAAGGAGAGAAAAAGGAGGGCAAAAGAGCTTCTGGAATTGGTCGGTC
TGGGAGACAGACTCCATCACCGGCCGAATCAGCTTTCAGGAGGTCAGCAACAAAGAGTTGCGATAGCGAGGGCTCTGGCA
AACGATCCTGTCTTCATCCTCGCAGACGAACCAACGGGAAATCTGGACACAAAAACTGGCGAAGAGATACTGGAGCTGTT
CAGAAAACTCCACGAGATGGGAAAAACGCTGGTTGTTGTGACTCACAACCTCGAGATGGTGGACGAAGGAACGTGCATCG
TGAGAATCAGAGATGGAAAAATCGAAGGTGTAGAACGTCGAGGTGTTGTGTATGGAGATACTTAA

Protein sequence : 
MKKVMELVDVWKIYDLGEVKVEALRGVSFEVFEGEYVIIIGPSGSGKSTLLHILGCLDRPTKGKVLIEGEEVSRMGDRRL
AQVRNRKIGFVFQSYNLLPRLTALENVELPMIYAGVPAKERKRRAKELLELVGLGDRLHHRPNQLSGGQQQRVAIARALA
NDPVFILADEPTGNLDTKTGEEILELFRKLHEMGKTLVVVTHNLEMVDEGTCIVRIRDGKIEGVERRGVVYGDT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpet_0568 YP_001244165.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-43 53
Tpet_0568 YP_001244165.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-53 52
Tpet_0568 YP_001244165.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-39 45
Tpet_0568 YP_001244165.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-40 44