|
Name : Tpet_0054 (Tpet_0054) Accession : YP_001243659.1 Strain : Thermotoga petrophila RKU-1 Genome accession: NC_009486 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 48436 - 50814 bp Length : 2379 bp Strand : - Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase DNA sequence : ATGAGAAACCTGAACGACAAGATGAAGGATATTTTCGAAAGGAGTGTGGAGGATATCAAAGAAAGAAATCAGAACCTGCT CAGACCAGAACACATTCTCCTTCAGATTCTTTACGATGAAAACGAGGCCACGAAGGTACTGAAAGATCTCAATGTAAACG TGGAAGAAGTGATTACTGAGCTGGAGGACTACATCGATTCCCAGTACGGGATATACTACGGATTCTCCGATCAGGTCTAT GTATCGAAAGAGCTTTCTTACATCCTGGAGCTGGCGAGAAAGGAAGCCAGACTCTTCAAGCAGAGGGATGTAGGTCCTCT TCACTTCCTTCTAGGACTGTTGAGAGACGGTTCCACGCACGCTGCCCGTGTCCTGAAAAAGTACGGCGTTGACTACGAAA AAGTGCTTCAGAAGATTAGGGAGCACGAAGAAGAGTACGCGACCGAACAGTCACCGCTCACGGCTTTTGCAACCGATCTC ACAAAATTGGCAAAAGAGGGGAAAGTAGGCCCTATCATAGGAAGGGACAAAGAAATCGAGCGCGTGATTGAAATTCTCAT GAGAAAAACCAAGAACAACCCAATTCTAATCGGTGATCCAGGTGTTGGAAAAACCGCTATTGTGGAAGGTCTCACACAGA GAATCGTTGAGGGGAAAGTCCCTGATCCTCTAAAAGATGTGCGCATACTGATGGTGGATCTCGGAAGGATGATAGCGGGA ACCAAGTACAGGGGAGAGTTTGAAGAAAGGCTGAAATCGTTCCTCGATGAAGTGATGAAACAGAAAGAAAAAACGATTCT CTTCATCGATGAAATACACACCCTGGTTGGTGCTGGCGCAGCCGAGGGAGCGATGGACGCTGCCAACATGTTGAAGCCGG CCCTTGCTCGCGGTGAAATACGCGTCATAGGTGCGACCACGCTGGATGAGTACAGAAAACACATAGAAAAAGACAAAGCG CTCGCGAGAAGATTCCAGCCGGTGATGGTGAGAGAACCGAGTGTGGAGGAGACCATAGAGATCTTGAAAGGGTTGAAGAA AGTCTACGAGGAGCACCACAAAGTGAAGATAGAAGACGAAGCGATAGAGGCAGCTGCCAAGCTCTCAGCGAGGTACATAA CAGACAGATTCTTGCCGGACAAGGCGATTGACCTGTTGGATGAAGCGGCAGCAAGAGTGAGACTCAGCGCTACAAAACAG GAAAAGGATGAAACGAAGCTTCGCGAGCTCGAAGAAAAAATAAAAGAGCTTGAAGCAAAAATCGACGAGCTCACTATAAG ATCTCAGTACAAAGAAGCGGCCGATCTCAAGAAAGAACTCTTCAAACTCAGGAACGAGTACGAAGCTTTGAAGAGTGGGA AACCGGTTGTCACAGCGGAGAAAATAGCAGAAGTGGTTGAATCCTGGTCTGGTGTACCAGTTTCCAGAATCGTTGAGTCT GAAAAGGAAAAGCTTCTGAAGCTCGAAGAGATAATCCACCAGAGACTCGTGGACCAGGAGGAAGCGGTCAAGGTAGTGGC CGATGCCATCAGGAAGGCAAGGGCTGGAATAAAAGATCCTAACAGGCCAGTTGGTACCTTCCTCTTCCTTGGACCAACGG GTGTTGGTAAGACTGAGCTCGCAAAGACACTCGCTGAAGTGCTCTTTGGAAGCGAAAACGCACTGATACGAATCGACATG ACCGAATACATGGAAAAGCACGCTGTCTCCAAGCTGATAGGAGCACCTCCGGGATACGTCGGTTACGAGGAAGGTGGTCA GCTGACCGAAGCCGTAAGAAGAAGACCGTACAGTGTCGTACTGCTTGATGAGATTGAAAAGGCGCATCCGGATGTGTTCA ACGTACTGCTTCAGATAATGGACGACGGAAGACTCACAGACAGCAAAGGAAACGTTGTGGATTTCAAGAACACGATCATC ATCATGACGAGTAACATAGCAAGCGATCTGATACTGAACTACGTTAAAGAAGGAAAGAGCTTCGATGAGATTGAAGAAAG AGTCAGAGAAGAGCTGAAACACTACTTCAGACCCGAGTTCATAAACAGGATAGACCACGTTGTTGTCTTCAAACCGCTTA CAAAAGAACACATGAAACAGATCGTGGAAATAATGATTAGAAGACTTGAAGCGCGGTTGAAGGACAAGAACATAAAACTC ACGATCACCGAATCGGCGAAAGAATACCTCGCAGAAGAAGGATACGATCCAACGTTCGGTGCAAGACCGCTGAGGCGGCT GATAGAAAGGGAAATAGAAACACCACTCGCAAGGATGATCATAGCAGGTGAAGTGCAGGAAGGTCAGACGGTGAGAGTGG ATTACAACGGTGAAAAATTGATCCTCGAAGTTGCCAGAGAACTCGAGAAGGTTCAGTAA Protein sequence : MRNLNDKMKDIFERSVEDIKERNQNLLRPEHILLQILYDENEATKVLKDLNVNVEEVITELEDYIDSQYGIYYGFSDQVY VSKELSYILELARKEARLFKQRDVGPLHFLLGLLRDGSTHAARVLKKYGVDYEKVLQKIREHEEEYATEQSPLTAFATDL TKLAKEGKVGPIIGRDKEIERVIEILMRKTKNNPILIGDPGVGKTAIVEGLTQRIVEGKVPDPLKDVRILMVDLGRMIAG TKYRGEFEERLKSFLDEVMKQKEKTILFIDEIHTLVGAGAAEGAMDAANMLKPALARGEIRVIGATTLDEYRKHIEKDKA LARRFQPVMVREPSVEETIEILKGLKKVYEEHHKVKIEDEAIEAAAKLSARYITDRFLPDKAIDLLDEAAARVRLSATKQ EKDETKLRELEEKIKELEAKIDELTIRSQYKEAADLKKELFKLRNEYEALKSGKPVVTAEKIAEVVESWSGVPVSRIVES EKEKLLKLEEIIHQRLVDQEEAVKVVADAIRKARAGIKDPNRPVGTFLFLGPTGVGKTELAKTLAEVLFGSENALIRIDM TEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEIEKAHPDVFNVLLQIMDDGRLTDSKGNVVDFKNTII IMTSNIASDLILNYVKEGKSFDEIEERVREELKHYFRPEFINRIDHVVVFKPLTKEHMKQIVEIMIRRLEARLKDKNIKL TITESAKEYLAEEGYDPTFGARPLRRLIEREIETPLARMIIAGEVQEGQTVRVDYNGEKLILEVARELEKVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-156 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tpet_0054 | YP_001243659.1 | ATPase | VFG0079 | Protein | 9e-168 | 50 |
| Tpet_0054 | YP_001243659.1 | ATPase | VFG0080 | Protein | 2e-137 | 50 |
