Gene Information

Name : Tpet_1646 (Tpet_1646)
Accession : YP_001245227.1
Strain : Thermotoga petrophila RKU-1
Genome accession: NC_009486
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 1640494 - 1641435 bp
Length : 942 bp
Strand : -
Note : catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway

DNA sequence :
GTGTCTGTGAACATGAAAGGGAGATCTCTTCTCACTCTTCTTGATTTTTCTTCTGAAGAGATCAGATACCTGCTCGATAT
CTCAAAGCAGGTGAAGATGGAGAGCAGGTCCAGACTGAGAACCGAAAGGTTCAAAGGGATGACACTCGCCATGATCTTCG
AGAAGAGATCGACAAGAACGAGACTCGCCTTTGAAACCGCTTTTGCGGAAGAAGGGGGACATGCGATCTTTCTCTCACCG
AACGACATACACCTTGGAACGAAAGAATCACTCGAGGATACCGCGCGCGTTCTTGGAAGAATGGTGGACGCCATCATGTT
CAGGGGCTACAAACAGGAAACTGTGGAAAAGCTGGCTGAGTACTCCGGTGTTCCCGTGTACAACGGACTCACCGACGACT
TTCACCCGACACAGGCGCTCGCCGACCTGATGACCATAGAGGAGAATTTCGGCAGATTGAAGGGTGTAAAGGTTGTTTTC
ATGGGGGACACCAGAAACAACGTTGCGACCTCCCTCATGATCGCCTGTGCGAAGATGGGCATGAATTTTGTAGCGTGTGG
TCCCGAAGAACTCAAGCCCAGACCTGACATATTCGAAAGGTGTCAGGAGATAGCGAGGGAAACCAGTGCAAGCGTTTCTT
TCACATCAAATTTGGAAGAGGCACTCGCAGGTGCCGATGTCGTTTACACGGACGTGTGGGCATCCATGGGGGAAGAAGAC
AAAGAAAAGGAGAGAATATCCCTTTTGAAGCCTTATCAGGTGAATAAAAGAGTGATGGAGATGACAGGTAAACCAGAAAC
GATCTTCATGCATTGTCTTCCGGCGGTGAAAGGTCAGGAAGTCACCTACGAAGTGATCGAAGGAAAACAGAGCAGGGTCT
GGGACGAGGCGGAGAACAGAAAGCACACCATAAAGGCAGTTATGATAGCAACGCTGTTGTGA

Protein sequence :
MSVNMKGRSLLTLLDFSSEEIRYLLDISKQVKMESRSRLRTERFKGMTLAMIFEKRSTRTRLAFETAFAEEGGHAIFLSP
NDIHLGTKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYNGLTDDFHPTQALADLMTIEENFGRLKGVKVVF
MGDTRNNVATSLMIACAKMGMNFVACGPEELKPRPDIFERCQEIARETSASVSFTSNLEEALAGADVVYTDVWASMGEED
KEKERISLLKPYQVNKRVMEMTGKPETIFMHCLPAVKGQEVTYEVIEGKQSRVWDEAENRKHTIKAVMIATLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-67 49
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-67 49
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-66 49
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-66 49
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-66 49
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-66 49
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 3e-65 48