Gene Information

Name : Tpet_1537 (Tpet_1537)
Accession : YP_001245121.1
Strain : Thermotoga petrophila RKU-1
Genome accession: NC_009486
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3839
EC number : -
Position : 1525241 - 1526308 bp
Length : 1068 bp
Strand : +
Note : PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase

DNA sequence :
TTGGCGCAGGTAAGAATAGACGGAGTGAAGAAATATTTCGGGAATGTGAAAGCCCTCGATGGAATCGACCTTGTTGTGAA
CGAAGGGGAGTTCCTGGTTCTTCTCGGTCCATCCGGCTGTGGAAAGACGACCCTTCTGAGGTGTATAGCGGGCCTCGAGC
AGGTGACCGGGGGAAGGATCTTCTTCAACGATCGCGATGTGACGAACCTTCCTCCGAAGGACAGGAACATTTCGATGGTC
TTCCAGAGCTACGCGGTGTGGCCCCACATGAAGGTGTACGACAACATCGCGTATCCTCTGAAACTGAAAAAAGTCCCGAA
AGAGGAGATAGAAAAGAGGGTAAAGTGGGCAGCGGATCTCCTTCACATCTCCGAACTCCTCGACAGATATCCCGCGCAGC
TCTCCGGAGGTCAGAGGCAGAGGGTTGCCGTTGCCCGCGCGATCGTTCACGAACCCGAAGTGCTCTTGATGGACGAGCCT
CTTTCTAATCTGGACGCGCTTTTGAGGGTGAAGATGAGAAGCGAGCTGAAAAAGCTCCAGGAAAGAATAGGAGTCACCAC
CATCTATGTGACTCATGACCAGACAGAGGCCATGACGATGGGAGACAGAATCGCGGTGATGAACCAGGGGAGAATCCAGC
AGGTTGGTACGCCCTCTGAGATCTATCACCACCCGGTGAACATCTTCGTTGCTGGTTTTGTGGGGTCTCCGCAGATGAAC
TTCTTAGAGATGGAAGTGAGATCGGAAGGAAATAGCGTTGTCCTCCAAAACGGTGAGATAAAGATTCCCGCGAAGACCGA
TCCAGGTGCAAAAAAGGTGATCCTTGGTATTCGACCGGAGAACGTCTATCTGGAGGAAAAGCCGAACACTTTGAAGCTGG
AAGGAGAGGTTTATTTCGCCGAGAAACTCATGTCGGATACGATTCTCCATCTCAACGTTGGAAGTGAGAAGATCGTCGCA
AAAATTCCAGGGGATGTGGATTTCAGAAGCGGTGAGAAGATCACGTTTTTCCTGGACGTTGAAAAGATCCATCTCTTTCA
CCCTGAGACGGGAGAGAGAATCTCATGA

Protein sequence :
MAQVRIDGVKKYFGNVKALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGRIFFNDRDVTNLPPKDRNISMV
FQSYAVWPHMKVYDNIAYPLKLKKVPKEEIEKRVKWAADLLHISELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEP
LSNLDALLRVKMRSELKKLQERIGVTTIYVTHDQTEAMTMGDRIAVMNQGRIQQVGTPSEIYHHPVNIFVAGFVGSPQMN
FLEMEVRSEGNSVVLQNGEIKIPAKTDPGAKKVILGIRPENVYLEEKPNTLKLEGEVYFAEKLMSDTILHLNVGSEKIVA
KIPGDVDFRSGEKITFFLDVEKIHLFHPETGERIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-39 44
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-39 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tpet_1537 YP_001245121.1 ABC transporter-like protein BAC0604 Protein 2e-47 43