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Name : Tpet_1244 (Tpet_1244) Accession : YP_001244834.1 Strain : Thermotoga petrophila RKU-1 Genome accession: NC_009486 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1257777 - 1259594 bp Length : 1818 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-ter DNA sequence : ATGGTAAGAAAGGCACTCCTTTTTGTAATCGACGTGGCTCTGACGTACTTTGCGGGTGTAGTGGCGCTCTTTTCGAGGTT TGGTTTTGACTTTCAGGAAATGAGCCGTTATGACGAATCCGTGATCGTATACACCGCTGTCTCGGCTGTTGTCTACATTC TGAACGGAAACTATTCCATCGTGTGGGAATACGCTAATGCCAGAGACTTTCTCATTCTCATAAGAGGAAGCGTTATCTCT TATCTTTCCAACCTTGCGTTTTTTTATGTTTACAGGGGAATAGTTCTTCCCAGATCCGTGGGGTTTGCCACCTTTCTTGG TTCGATGGCCCTTCTTGTGCTGAGCAGGATCACATGGCAGTGGCTGACTGTGAACAGGCTAAGAAAAACCTCAGGGGAGA AGAGAATACTGGTCATAGGGGCAGGAGATGCGGGAGTCTCTATTCTCGAAGAATTTGAGAAACACCCCCATTTAGGAAAA ATAGTGGCCTTCGTGGACGATTCTCCCAGAAAGATCGGTCGAAAGGTGAGGGGAGTTCCGGTTTTTGGACCAATAGAGAA AACAATGGAATTCGTGGAGAAAATGAACGTGGACGAAATCGTGATAGCTATACCTTCAGCTTCCAGAGCTGAGATGGAAC GAATTCTCAAAAGCATCGATTTGAAAAAGGTCAGAGTAAAGACCCTCCCCAGTGTGAGAGAGCTGATAGAAGGACGTGTC AGGATCTCCCATCTGAAGGAAATATCCATAGAAGATCTTCTGGGTCGCGAAGAAGTGAAGGTGGATTTTCATGAAATAGG AAAATTCTTGAAAGGGAAGAAAATTCTTGTGACCGGAGCAGGAGGCAGTATCGGTTCTGAGCTTTGCAAGCAAATAGCCA GGATGAATCCAGCGGAGATCTTTCTTCTGGGCCACGGAGAAAACAGTATATATCTCATAAACGAGTTTCTCACCGAACAC TTTCCGGAGGTGAAGAAAAAAAGGATCATAGCGGATGTTGCCGACAGAAAGATAATGGAACACTGGTTGACCCAGCTGAG GCCGGACGTGATCTTCCACGTGGCAGCACACAAGCACGTTCCTTTGATGGAGGAAAATCCGCTTGAGGCTTTCAGAGTGA ACGTTCTGGGAACGATGAATCTCGTGGAACTCTCCGAAAGGCTCGGTGTTAAGTATTTTGTTTTCATCTCGACAGACAAA GCGGTGAATCCCACTTCTGTGATGGGCCTCACCAAGAGGATAGCGGAACTCTACATCCTTTCGAGAGAAAAAAACAGCAC GAATTTCTCGATCGTGAGGTTTGGAAACGTTCTTGGAAGCAGGGGAAGCGTAGTGGAAAAATTTCGCCGTCAGATAGAAA AAGGTGGGCCTGTAACGGTGACGGATCCACGAATGAAGCGCTACTTCATGTCCATACCTGAGGCCGTCTCCCTCATTCTC CAGTCCCTTCTCTTCTCTTCCGGAAAGGACCTCTTCATTCTCGACATGGGAGAGCAGATACCCATCCTGAAGCTTGTGGA AACCATGATCATGCTCTCTGGGTACACCCCTTACCAGGACATAAAGATAGTTTTCACCGGAATCAGGCCGGGGGAGAAGA TGTACGAAGAGTTGCTCTACCCTTACGAGATGAAAGAGTTGACTCCACACTCGAAAATCTTCAGAGTGAAGACATCCGTT CTTCCAGGGAAAGAGAGCGTAGAACAGGCAATCAACAGAATGAAAGAAGCCTTCGAAAACAGCGACGTAAAAGGACTTCT CACCGAAATGAAAAAATTAGTCCCGGAGGCACAAATAAATGTGGGAAGCGATAATTAG Protein sequence : MVRKALLFVIDVALTYFAGVVALFSRFGFDFQEMSRYDESVIVYTAVSAVVYILNGNYSIVWEYANARDFLILIRGSVIS YLSNLAFFYVYRGIVLPRSVGFATFLGSMALLVLSRITWQWLTVNRLRKTSGEKRILVIGAGDAGVSILEEFEKHPHLGK IVAFVDDSPRKIGRKVRGVPVFGPIEKTMEFVEKMNVDEIVIAIPSASRAEMERILKSIDLKKVRVKTLPSVRELIEGRV RISHLKEISIEDLLGREEVKVDFHEIGKFLKGKKILVTGAGGSIGSELCKQIARMNPAEIFLLGHGENSIYLINEFLTEH FPEVKKKRIIADVADRKIMEHWLTQLRPDVIFHVAAHKHVPLMEENPLEAFRVNVLGTMNLVELSERLGVKYFVFISTDK AVNPTSVMGLTKRIAELYILSREKNSTNFSIVRFGNVLGSRGSVVEKFRRQIEKGGPVTVTDPRMKRYFMSIPEAVSLIL QSLLFSSGKDLFILDMGEQIPILKLVETMIMLSGYTPYQDIKIVFTGIRPGEKMYEELLYPYEMKELTPHSKIFRVKTSV LPGKESVEQAINRMKEAFENSDVKGLLTEMKKLVPEAQINVGSDN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-80 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tpet_1244 | YP_001244834.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-79 | 41 |
