|
Name : Tpet_1031 (Tpet_1031) Accession : YP_001244625.1 Strain : Thermotoga petrophila RKU-1 Genome accession: NC_009486 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 1060566 - 1061921 bp Length : 1356 bp Strand : + Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase DNA sequence : ATGCGTGTTCCCCCGCACAACTTAGAGGCCGAAGTTGCTGTGCTCGGAAGCATATTGATAGATCCGTCGGTAATAAACGA CGTTCTTGAAATTTTGAGCCACGAAGATTTCTATCTGAAAAAACACCAACACATCTTCAGAGCGATGGAAGAGCTTTACG ACGAAGGAAAACCGGTGGACGTGGTTTCCGTCTGTGACAAGCTTCAAAGCATGGGAAAACTCGAGGAAGTAGGTGGAGAT CTGGAAGTGGCCCAGCTCGCTGAGGCTGTGCCCAGTTCTGCACACGCACTTCACTACGCGGAGATCGTCAAGGAAAAATC CATTCTGAGGAAACTCATTGAGATCTCCAGAAAAATCTCAGAAAGTGCCTACATGGAAGAAGATGTGGAGATCCTGCTCG ACAACGCAGAAAAGATGATCTTCGAGATCTCAGAGATGAAAACGACAAAATCCTACGATCATCTGAGAGGCATCATGCAC CGGGTGTTTGAAAACCTGGAGAACTTCAGGGAAAGAGCCAACCTTATAGAACCCGGTGTGCTCATAACGGGACTACCAAC GGGATTCAAAAGTCTGGACAAACAGACCACAGGGTTCCACAGCTCCGATCTGGTGATAATAGCAGCGAGACCCTCCATGG GAAAAACCTCCTTCGCACTCTCAATAGCGAGGAACATGGCTGTCAATTTCGAAATCCCCGTCGGAATATTCAGTCTCGAG ATGTCCAAGGAACAGCTCGCTCAAAGACTACTCAGCATGGAGTCCGGTGTGGATCTTTACAGCATCAGAACAGGATACCT GGATCAGGAGAAGTGGGAAAGACTCACAATAGCGGCTTCTAAACTCTACAAAGCACCCATAGTTGTGGACGATGAGTCAC TCCTCGATCCGCGATCGTTGAGGGCAAAAGCGAGAAGGATGAAAAAAGAATACGATGTAAAAGCCATTTTTGTCGACTAT CTCCAGCTCATGCACCTGAAAGGAAGAAAAGAAAGCAGACAGCAGGAGATATCCGAGATCTCGAGATCTCTGAAGCTCCT TGCGAGGGAACTCGACATAGTGGTGATAGCGCTTTCACAGCTTTCGAGGGCCGTAGAACAGAGAGAAGACAAAAGACCGA GGCTGAGTGACCTCAGGGAATCCGGTGCGATAGAACAGGACGCAGACACAGTCATCTTCATCTACAGGGAGGAATATTAC AGGAGCAAAAAATCCAAAGAGGAAAGCAAGCTTCACGAACCTCACGAAGCTGAAATCATAATAGGTAAACAGAGAAACGG TCCCGTTGGAACGATCACTCTGATCTTCGACCCCAGAACGGTTACGTTCCATGAAGTCGATGTGGTGCATTCATGA Protein sequence : MRVPPHNLEAEVAVLGSILIDPSVINDVLEILSHEDFYLKKHQHIFRAMEELYDEGKPVDVVSVCDKLQSMGKLEEVGGD LEVAQLAEAVPSSAHALHYAEIVKEKSILRKLIEISRKISESAYMEEDVEILLDNAEKMIFEISEMKTTKSYDHLRGIMH RVFENLENFRERANLIEPGVLITGLPTGFKSLDKQTTGFHSSDLVIIAARPSMGKTSFALSIARNMAVNFEIPVGIFSLE MSKEQLAQRLLSMESGVDLYSIRTGYLDQEKWERLTIAASKLYKAPIVVDDESLLDPRSLRAKARRMKKEYDVKAIFVDY LQLMHLKGRKESRQQEISEISRSLKLLARELDIVVIALSQLSRAVEQREDKRPRLSDLRESGAIEQDADTVIFIYREEYY RSKKSKEESKLHEPHEAEIIIGKQRNGPVGTITLIFDPRTVTFHEVDVVHS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-61 | 43 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-63 | 42 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-63 | 41 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-62 | 41 |
