Gene Information

Name : BBta_0940 (BBta_0940)
Accession : YP_001237102.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : 1.1.1.100
Position : 974150 - 974950 bp
Length : 801 bp
Strand : +
Note : 3-oxoacyl-ACP reductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence : 
ATGGATCGGCTCAAGGGCAAGGTGGCGATGGTGGTGGGCGCCGGCTCGATCGGACCGGGCTGGGGCAACGGCAAGGCGAC
CGCGGTGACCTTCGCGCGGCAGGGCGCGAAAGTGTTCTGCGTCGACCGCAACGGAGACGCGGCGGCGGAGACGGCGTCGA
TCATTTCAGGCGAAGGCGGTCAGGCCGAGGCGTTCACCGCCGACGTGTCGAAAGCTGCCGAGGTCGAGGCCATGGTGAAG
GCTTGCCTTGCAGCCTTTGGCCGCATCGACGTGCTCGACAACAATGTCGGGATCGCCGAGATGGGCAGCGTCGTCGATGT
CGAGGAGGCTGAGTGGGACCGCGTCTTCGCGGTCAATCTCAAGAGCGCTTATTTTGCCATGAAGCACGTCATTCCCGTGA
TGATCGGCCAGGGCGGCGGCTCGATCATCAACATCTCCTCGGTGGCCTCGATCCGGCAGGTCGGCATTTCCTATGTCAGC
TACGGCGCGAGCAAGGCGGCGATGAACCAGATGACGCGCACCACCGCGGTCGAGTTCGCGCCGAGGCATGTCCGTGTGAA
TGCGATCCTGCCCGGGCTGATGAAGACGCCGATGGTCGAACATTCCGCCGGCCTCGCCGCGAGCTATGCCAAAGGCGACG
TCGAGGAGATGTGGAAGAAGCGCGACGCACAGGTGCCGATGGGGCATATGGGCGACGCCTTCGACGTCGCCAACGCCGCC
CTGTTCCTCGCCTCCGACGAATCGCGCTACGTCACGGGGATCACGCTGGTCGTCGACGGCGGACTGACCTGCCGGAGCTG
A

Protein sequence : 
MDRLKGKVAMVVGAGSIGPGWGNGKATAVTFARQGAKVFCVDRNGDAAAETASIISGEGGQAEAFTADVSKAAEVEAMVK
ACLAAFGRIDVLDNNVGIAEMGSVVDVEEAEWDRVFAVNLKSAYFAMKHVIPVMIGQGGGSIINISSVASIRQVGISYVS
YGASKAAMNQMTRTTAVEFAPRHVRVNAILPGLMKTPMVEHSAGLAASYAKGDVEEMWKKRDAQVPMGHMGDAFDVANAA
LFLASDESRYVTGITLVVDGGLTCRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-28 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-28 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 9e-29 41
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-30 41