Gene Information

Name : BBta_7555 (BBta_7555)
Accession : YP_001243309.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 7937255 - 7938889 bp
Length : 1635 bp
Strand : -
Note : dipeptide/oligopeptide/nickel transporter; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic

DNA sequence :
ATGTCTGATCCCGTCGTTTCTGATCCCGTCGTTGCCATCAAGAACCTGCGCATCGCTTTGCCGAACGGCGCGGAGCGCAC
GCATGCCGTCGATGGTGTCTCGTTCGATCTCACTGCGGGGAAGATCGTCTGCGTCGTCGGCGAGTCCGGCTCGGGCAAGT
CGATGTGCGCCCATGCGCTGCTCGGCCTGCTGCCCGACACAGTCAAGGTGGACAGCGGCGAGATCCGCTTCGACGGACGC
GATCTGCTGACCGTCGACGAGGACGGCTGGCGCGATCTGCGGGGCCGCCGCATCGCGATGGTGTTCCAGGAGCCGATGAC
CGCGCTCAATCCGTTGATGCGGATCGGCGACCAACTGATGGAGGTATTCGAGGCGCACGATTTGCTGACGCCGCGGGAGC
GCCGCGCGAAGGCGCTGGCGCTGGTGCGCGAGGTCGGCCTGCCCGATCCGGAGCGCATCATCCGGGCCTATCCGCACCAG
CTCTCCGGCGGCCAGCGCCAGCGTGCGATGATCGCGATGGCGCTCGCGCTCGAGCCGGCCGTGCTCGTCGCGGACGAGCC
GACCACCGCGCTCGACGTCACGACGCAGGCGCAGATCCTCAAGCTGATCCGCAATCTCCAGGCCAGCCACAACATGGCTG
TCATGTTCATCACCCATGATTTCGGCGTCGTCGCCGATATCGCCGATCAGGTCGTGGTGCTGCGCCATGGCAGAGTCGTC
GAGGAGGGCACGGCCGCCGCGGTGCTCGGCAGCCCGCAGCACGACTACACCAAGGCGTTGCTTGCTGCGGTTCCGTCCTT
CGATCCGCCGCCGCGGCAATCGCGCGAGGCGGCGCCGCGGGCCGTGGAGGTGATCGGCCTCGACAAGACCTATTTGACGC
CGACGGGCTGGTTCCGCCCCAAGCGCGAGACGCGCGCCGCCCATGCGGTGCATTTTGCCATCCACCAGGGTGAGACGCTC
GGGCTGGTCGGAGAGTCCGGTTCGGGCAAGTCATCGGTCGCGCGGCTCGTCATGCGGCTGATCGAAGCGGACCGCGGCAC
GGTGCGCATCGGCGACGTCGATCTCACCGCGCTGGAAGGCCGCGCGCTGCGCGCCCAGCGGCATCGCATCCAGATGATCT
TCCAGGATCCATTCGCGTCGCTGAACCCGCGCCGCAAGGTTGGTCGCATCATCGCCGATGGCATGGTGGCGCGTGGCACG
CCGCTCGATACTGCGCTGAAGCGTGCGCAGGAGCTGCTGGCGATGGTCGGGCTCGATGCCGGCGCCACCGGTCGCTATCC
GCATGAATTCTCCGGCGGTCAGCGCCAGCGCATCGGCATCGCACGCGCGCTCGCGCTCGATCCGGAGATCATCGTCGCCG
ATGAGGCCGTCTCCGCGCTCGACGTCTCCGTGCAGGCGCAGGTGCTGCGCCTGCTGGAGGATTTGAAGGCGCGGCTCGGC
CTGTCAATGCTGTTCATCACGCATGATCTGCGCGTCGCCGCGCAGATCTGCGATCGCATCGCCGTGATGCAGAAGGGCGA
GATTGTCGAGCTGAAGCCGACGGCGGCGCTGTTCGCCAATCCTGAGCACGCCTACACGCGCGAGCTGCTCGCGGCCGTGC
CCGGACGCCGCCCCGAGATGGCGGTGATCTCGTAG

Protein sequence :
MSDPVVSDPVVAIKNLRIALPNGAERTHAVDGVSFDLTAGKIVCVVGESGSGKSMCAHALLGLLPDTVKVDSGEIRFDGR
DLLTVDEDGWRDLRGRRIAMVFQEPMTALNPLMRIGDQLMEVFEAHDLLTPRERRAKALALVREVGLPDPERIIRAYPHQ
LSGGQRQRAMIAMALALEPAVLVADEPTTALDVTTQAQILKLIRNLQASHNMAVMFITHDFGVVADIADQVVVLRHGRVV
EEGTAAAVLGSPQHDYTKALLAAVPSFDPPPRQSREAAPRAVEVIGLDKTYLTPTGWFRPKRETRAAHAVHFAIHQGETL
GLVGESGSGKSSVARLVMRLIEADRGTVRIGDVDLTALEGRALRAQRHRIQMIFQDPFASLNPRRKVGRIIADGMVARGT
PLDTALKRAQELLAMVGLDAGATGRYPHEFSGGQRQRIGIARALALDPEIIVADEAVSALDVSVQAQVLRLLEDLKARLG
LSMLFITHDLRVAAQICDRIAVMQKGEIVELKPTAALFANPEHAYTRELLAAVPGRRPEMAVIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 7e-104 45
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-81 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-81 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 8e-81 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 8e-81 42