Gene Information

Name : BBta_6726 (BBta_6726)
Accession : YP_001242528.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 7009860 - 7011530 bp
Length : 1671 bp
Strand : -
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
GTGATTCCATCCCTGTCGATGATCACAGCCGATTCGCTCCCCGATGATGTCGCGACGCTGAAGGCGCTGGTGCTCGCTGG
CCAGGCGGCGCTCACCGAGGCGACGGCAGCCCAGCTCGCGGCAGAAGCCAAGGCGCGCAATCTCGAAGCCGAGGTCCGCT
CCCGCACGCTGCTGATCGAGCAGATGAAGTTCACGATCGCCAAGCTCAAGCACGAGCAGTTCGGGCCCTCGTCAGAACGT
GCATCGGTGCTTGAGCAGCTCGAACTCGAACTTGCCGATCTCGAAGAGGATGCGGCCGAGGCAGAAGCTGCGGCGCAAAT
GGCAGCCGAACGAGCCAAGGCCGAGAAGATCGACGTGCGCCCGTTCGAGCGCCGGCAGCCGGCGCGGCGGCCGCTGCCCG
AGCACTTACCGCGCGAGCGCATCGTGCATCCTGCACCGGCCCATTGCCCGTGCTGCGGTGGCGACAGGCTGCGCAAGATC
GGCGAGGACGTCACGGAGACGCTGGAGCTCGTTCCACGACAGTGGAAGGTGATCCAGCACGTCCGAGAGAAGTTCTCCTG
TCGTGCCTGCGAGGCGATCACGCAGCCTCCGGCGCCGTTCCACCCGATCTCACGTGGACGCGCGGGGCCGCGCCTGCTGG
CGCACATCCTATTCGCCAAATACGGACTGCACCTGCCGCTCAATCGGCAGAGCACGACCTATGCGCATGAGGGCGTGGCG
CTCGATGTCTCCACGCTGGCCGACTGGGTCGGCGCGGCAGCTGCGACCTTGATGCCGCTGGTCGAGGCGATCAAGACGCA
CGTACTTGCAGGCGAGCGTCTCCACGTCGACGACACCACGGTGCCGGTTCTGGCCAAGGGCAAAACGCGCACGGGGCGCG
TTTGGACCTATGTCCGCGACGATCGTCCCTTTGCCGGGCACGCGCCGCCGGCAGCCTTGTTCTTCTACTCGCCTGACCGC
TCCGGTGCGCATCCCGAGACGCATCTTGCCGGCTATGCCGGACCGATGCAGGCGGACGCCTATGCCGGCTTCAACCGCCT
CTACGAGGCCTCGCGCAAGCCGGGCCCGATCATCGAGGTCGGCTGCTGGGCGCATGCACGGCGCAAGTTCTTCGAGATCG
CGCGGCTGAAGAAAGCGCCGATCGCGATCGAGGCGATCGCGAAGATCGACGCGCTGTTTGCGATCGAACGCGAGATCAAC
GGTCTGCCAGCCCACGAGCGCAAAGCCGTGCGCGACGCACGCAGCCGCCCGCTAGTCGATGAGCTTCACGCCTTCCTGCG
CGACCGCCGCGCCAAGCTCTCCGGCAAGAGCGAGACCGCCAAGGCGATCGACTACAGTCTCAAGCGCTGGCAGGTGTTCA
CACGCTTCATCGACGATGGTCGCCTGTGCATGACCAACAATGCCGCCGAACGCGAACTGCGCGCCGTAGCCGTCGGCCGC
AAGAACTGGACCTTCGCCGGCTCCGACGATGGCGGCCGCCGTGCCGCCGCCATCTACACCCTGATCCAGACCGCCAAGCT
CAACGATCTCGATCCGCTGGCCTGGTTGACCGACGTGCTGCTGCGGATCAATGATCATCCGGCGTCGAGGCTCGACGAGC
TGCTGCCGTGGAATTGGTCAAAACCCAGAACCCTTGTCGCCGCTGCCCGCTCAGATGAAGATCACGTTTAA

Protein sequence :
MIPSLSMITADSLPDDVATLKALVLAGQAALTEATAAQLAAEAKARNLEAEVRSRTLLIEQMKFTIAKLKHEQFGPSSER
ASVLEQLELELADLEEDAAEAEAAAQMAAERAKAEKIDVRPFERRQPARRPLPEHLPRERIVHPAPAHCPCCGGDRLRKI
GEDVTETLELVPRQWKVIQHVREKFSCRACEAITQPPAPFHPISRGRAGPRLLAHILFAKYGLHLPLNRQSTTYAHEGVA
LDVSTLADWVGAAAATLMPLVEAIKTHVLAGERLHVDDTTVPVLAKGKTRTGRVWTYVRDDRPFAGHAPPAALFFYSPDR
SGAHPETHLAGYAGPMQADAYAGFNRLYEASRKPGPIIEVGCWAHARRKFFEIARLKKAPIAIEAIAKIDALFAIEREIN
GLPAHERKAVRDARSRPLVDELHAFLRDRRAKLSGKSETAKAIDYSLKRWQVFTRFIDDGRLCMTNNAAERELRAVAVGR
KNWTFAGSDDGGRRAAAIYTLIQTAKLNDLDPLAWLTDVLLRINDHPASRLDELLPWNWSKPRTLVAAARSDEDHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 6e-79 50
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-78 50
tnp AEA34686.1 transposase Not tested Not named Protein 2e-79 50
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-78 50
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-79 50
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-79 50
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-79 50
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-79 50
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-79 50
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-79 50
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-83 50
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-79 50
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-79 50
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-76 48
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 6e-77 47
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 6e-75 47
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 6e-75 47
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 2e-64 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_6726 YP_001242528.1 transposase VFG0793 Protein 9e-80 50