Gene Information

Name : BBta_6373 (BBta_6373)
Accession : YP_001242194.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 6636942 - 6637157 bp
Length : 216 bp
Strand : +
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic

DNA sequence :
ATGCGCGAACCGGACCGTATCATCCGTCTGAAAACTGTCCTTTCCCGGACCGGGCTGTCCCGGTCCACCATCTACCGCAA
GATCGCCGAAGGCACGTTCCCGGCTCAGCTCAAAATCAGCACCAACGGGACCGGCTGGCATGAATCCGACATCAACCGCT
GGATCGCAGATCCTGTCGGATGGCGTCCGACAGGCGAGTTCGATGAAGTCCGCTGA

Protein sequence :
MREPDRIIRLKTVLSRTGLSRSTIYRKIAEGTFPAQLKISTNGTGWHESDINRWIADPVGWRPTGEFDEVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 4e-09 43
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 4e-09 43
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 7e-07 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_6373 YP_001242194.1 phage transcriptional regulator, AlpA VFG1141 Protein 1e-09 43