Gene Information

Name : BBta_6362 (BBta_6362)
Accession : YP_001242184.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 6626931 - 6627278 bp
Length : 348 bp
Strand : -
Note : IS66 Orf2 like domain; Evidence: Similar to previously reported genes of unknown function

DNA sequence :
ATGATTGCCATACCGGGTAATGTGCGGGTGTGGCTTGCGACCGGCCATACCGATATGCGGCGCGGATTCCCGAGCCTGGC
ACGTCTGGTTCAGGAGAGCTTGAAGCGGGATCCGCACGTTGGTGATCTCTATGTTTTTAGGGGCCGTCGGGGCGACCTGA
TCAAGATCATTTGGCATGACGGCCAGGGCGCGTGTCTCTTCACGAAGCGGTTGGAGCGCGGCCGCTTTCTGTGGCCATCG
GTGGCGGACGGCGTTGTCACGATCAGCGTTGCGCAACTATCCTATCTCTTGTCCGGAATTGATTGGCGGATGCCGCAGGC
AACCTGGCGGCCGCAGGCTTCCGGATAA

Protein sequence :
MIAIPGNVRVWLATGHTDMRRGFPSLARLVQESLKRDPHVGDLYVFRGRRGDLIKIIWHDGQGACLFTKRLERGRFLWPS
VADGVVTISVAQLSYLLSGIDWRMPQATWRPQASG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 5e-29 59
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 4e-29 59
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 4e-29 59
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 8e-26 55
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 1e-21 55
unnamed AAL99258.1 unknown Not tested LEE Protein 9e-27 55
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 9e-27 55
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-26 55
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 1e-26 55
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 1e-26 55
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 1e-26 55
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-26 55
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 8e-26 55
unnamed AAC31493.1 L0014 Not tested LEE Protein 9e-27 55
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-26 55
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 8e-26 55
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 9e-27 55
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 2e-26 54
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 2e-26 54
unnamed AAL08461.1 unknown Not tested SRL Protein 2e-26 54
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 3e-28 53
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 3e-28 53
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 2e-27 51
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 4e-28 51
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 2e-27 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_6362 YP_001242184.1 hypothetical protein VFG1665 Protein 2e-29 59
BBta_6362 YP_001242184.1 hypothetical protein VFG1517 Protein 6e-22 55
BBta_6362 YP_001242184.1 hypothetical protein VFG1709 Protein 4e-27 55
BBta_6362 YP_001242184.1 hypothetical protein VFG0792 Protein 4e-27 55
BBta_6362 YP_001242184.1 hypothetical protein VFG1698 Protein 3e-27 55
BBta_6362 YP_001242184.1 hypothetical protein VFG1052 Protein 7e-27 54
BBta_6362 YP_001242184.1 hypothetical protein VFG1737 Protein 1e-28 51