Gene Information

Name : BBta_6361 (BBta_6361)
Accession : YP_001242183.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 6625271 - 6626854 bp
Length : 1584 bp
Strand : -
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
ATGTCCTCCGATCCGCTTCCCGCCGATCTTGCCGCTGCGCATGCGATGATCCTTGCGCAGCGCGAGCAGCTGACGCTGGC
CAAGAGCGAAGTGACCGTCGGCCGCCTGGAAATCGAGCGGCTGAAGCTGATGCTGGCCAAGGCACGGCGCGAGCAGTTCG
GGCAATCTTCTGAACGCGGCAGGCTGCTGGTCGAGCAGCTTGAGCTGGCCATCGAGGATCTTGAAGAGACCCAGGCCGAG
CAGGAAACCAGGGCCGAGATCGCGGCACCTGAAGCCGCCAAACAGAAGCGCGCACAAAATCCGCGGCCGCCGCGACGTCC
CCTGCCAGATAATCTGCCGGTCGAACGTATCGTCGAACCCGCGCCTTGCGCCTGCGGTAAGTGCGGCAGCGAGCGGCTGC
ACAAGCTTGGCGAGGTTGTATCGAAGACCCTTGAATGCGAGCCGCGGCGCTGGAAGATCATCGAGCACGTCCGCGAAAAG
TTCTCCTGCCGGGACTGCGAGGCGATTACCGAGGCGCCGGCACCGTCCCATCCGATCCCGCGTGGCTTCGCCGGGCCGAG
CCTGCTGGCGATGGTGCTGGTCAACAAGTTCCTGCTGCATCAGCCGCTGAACCGGCAGAGCCAGACCTATGCCCGGGAAG
GGATCGAGATCGATGTCTCGACCCTGGCGGATCGGATCGGGGCCTGCGTGGTGGCGCTCGCCCCAATTATTGAGGCTATC
CGGACTCATGTCATGAGCGCGGAACGCATCCATGCCGATGACACGACGGTGCCCGTGCTGGCGAAACTGAAGACTGTCAC
CGGCCGGATCTGGACCTACGTTCGCGACGACCGGCCGTTTGGCGGTCGGGATCCACCGGCGGCGGTGTTCCATTACTCGC
GCAGTCGTGCCGGGGAGCATCCGCAAGGCCATCTTGCCGGCTATGTGGGCCTCATGCAGGCCGATGCCTTTGATGGATAC
AACCAGCTCTACATGGCTCAAAGGAAGCCGGCTCCGATCGTTGAAGCGGCTTGCTGGAGCCACGGCCGGAGGAAGTTTGT
CGACCTGGTAAAACAGGGAGAGGCGCCGGTCGCCAGCGAGGCGGTGCGTCGTATCGACATGCTGTTCGAGATCGAGCGCA
GCATTAATGGCAAAACCCCGGAACAGCGGCTTCTCGTACGCCGTGAACGATCGCGGCCGCTCGTTGCCGAGCTTGAAATC
TGGATGCGCCAGCAGCAAGCGTTACTCTCCACCAAGAACGACACCGCCAAAGCGATCAACTACCTCTTCAACGGCTGGGC
AGCGTTCACCCGCTTCCTCGACGACGGTCGCGTCTGTCTTACGAACAACGCCGCCGAACGAGCGTTGCGGGGTGTGGCGG
TCGGAAGAAGGAATTGGACCTTTGCCGGTTCAGACGTTGGCGGCCATCGGGCTGCCGCCGTCTATACCTTGATCGAAACT
TGCAAGATGAACGACGTCGATCCGCAAGCCTGGCTCGCGGACGTGCTGGCCAGGCTTCCAGATCACCCCGCGAACAAAGT
CAACGAATTGCTTCCCTGGAATTGGAAGGCGAACCAACGGTCAAAGGCCGCCGTTGCTGCCTGA

Protein sequence :
MSSDPLPADLAAAHAMILAQREQLTLAKSEVTVGRLEIERLKLMLAKARREQFGQSSERGRLLVEQLELAIEDLEETQAE
QETRAEIAAPEAAKQKRAQNPRPPRRPLPDNLPVERIVEPAPCACGKCGSERLHKLGEVVSKTLECEPRRWKIIEHVREK
FSCRDCEAITEAPAPSHPIPRGFAGPSLLAMVLVNKFLLHQPLNRQSQTYAREGIEIDVSTLADRIGACVVALAPIIEAI
RTHVMSAERIHADDTTVPVLAKLKTVTGRIWTYVRDDRPFGGRDPPAAVFHYSRSRAGEHPQGHLAGYVGLMQADAFDGY
NQLYMAQRKPAPIVEAACWSHGRRKFVDLVKQGEAPVASEAVRRIDMLFEIERSINGKTPEQRLLVRRERSRPLVAELEI
WMRQQQALLSTKNDTAKAINYLFNGWAAFTRFLDDGRVCLTNNAAERALRGVAVGRRNWTFAGSDVGGHRAAAVYTLIET
CKMNDVDPQAWLADVLARLPDHPANKVNELLPWNWKANQRSKAAVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-84 47
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 1e-83 46
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 2e-83 46
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 2e-83 46
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 1e-94 45
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 9e-86 44
tnp AEA34686.1 transposase Not tested Not named Protein 1e-86 44
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 9e-86 44
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-86 44
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-86 44
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-86 44
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-86 44
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 6e-87 44
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 4e-87 44
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 3e-86 44
unnamed AAL57570.1 unknown Not tested LEE Protein 8e-87 44
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 8e-81 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_6361 YP_001242183.1 transposase VFG0793 Protein 5e-87 44