Gene Information

Name : ntrC (BBta_6359)
Accession : YP_001242181.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Resistance
Product : nitrate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 6623267 - 6624091 bp
Length : 825 bp
Strand : +
Note : Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic; PUBMED: 8437564

DNA sequence :
ATGATAGCAACGGCGGCGCCGGCTATTCCCTTCGCTGAACTGAACGCAAGGAGTTCACAGCGAACGGGCGGACGCTCCGC
GATCGATTGTCGGGGGGTGACGTTTGGGTACGCCGCTTCTGTCGGCGCAAAATCGATCATTTTCAATCTCAGTCTAACAA
TCAAAAACGGCGAATTCGTCTGCGTTCTCGGACAGAGCGGATGCGGAAAGACAACCTTGTTGTGCCTCATCGCGGGTTTT
CTCCGGCCGACCTCCGGCGACATCGTTGTCGAAGGGCAGAGAGTGCGAGGGCCAGATCCCCAGCGCGGGATGGTGTTTCA
GGAGTACTCCCTGTTTCCATGGCTAACGACACGCGGGAATGTCGAGTTTGGGCTCCGCATGCGAGGGGTAAGCAGGTCAG
AACGTCGTGCCACGTCTGATCGGTACCTAGAGTTGGTTGGACTGGGTCAGGCTGCTGGCAACTATCCGTTCCAGCTTTCA
GGAGGAATGAAGCAGCGCGCCGCCATTGCACGAGCGCTGGCCGCAAATCCGCGCGCCCTGTTAATGGATGAACCGTTTGC
CGCATTGGATGCGATGACGCGGGCCCATTTGCAGGAACAATTGCTTGCGATCTATAGGCAAGCCCGAATGACCATTGTAT
TCGTTACGCACAACATTGCAGAGGCGATATCATTGGCGACACGTATCATCGTGCTCGGCCAGGGCGGCCAAATCATCGAA
GATTTGCCGGTGACGAGCGAGTATCCGCGATCGCGCACAGGGCCGGAATTCAATGAATTGTATAATAGGCTTGGAACTGC
GTTGGGCGCGAGGCAGATCGAATGA

Protein sequence :
MIATAAPAIPFAELNARSSQRTGGRSAIDCRGVTFGYAASVGAKSIIFNLSLTIKNGEFVCVLGQSGCGKTTLLCLIAGF
LRPTSGDIVVEGQRVRGPDPQRGMVFQEYSLFPWLTTRGNVEFGLRMRGVSRSERRATSDRYLELVGLGQAAGNYPFQLS
GGMKQRAAIARALAANPRALLMDEPFAALDAMTRAHLQEQLLAIYRQARMTIVFVTHNIAEAISLATRIIVLGQGGQIIE
DLPVTSEYPRSRTGPEFNELYNRLGTALGARQIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ntrC YP_001242181.1 nitrate ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-19 41