|
Name : kdpB (BBta_6337) Accession : YP_001242161.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 6601125 - 6603242 bp Length : 2118 bp Strand : - Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGGAAACCGTCAAACTGCAGAAGCGCTCGTCGATGTCGACGATGCTCGATGCGAAGATCGTGCTGCCCGCCATCAAGGC CGCTTTCGTCAAGCTCGATCCGCGGCTGATGATCAAGAACCCCGTGATGTTCGTGGTCGAGATCGTCGCCGCGCTCACCA CCGTCATCTTCCTGCGCGATGTCGTGACCGGCGGCGCGAATCTCGGCTTCACCTTCCAGATCATCCTCTGGCTGTGGTTC ACCGTGCTGTTCGCGAATTTCGCCGAGGCCGTCGCCGAAGGCCGCGGCAAGGCGCAGGCGGATTCGCTGCGCAAGACCCG CACCGAGAGCCAGGCCAAGCTGCTGACCGGGACGAGCCCGGCGGATCACACCTACCGGCTCGTTGCGGGCACCAGCCTGA AGGTCGGCGACATCGTGCTGGTCGAGGCCGGCGACACGATCCCGTCCGACGGCGAGGTGATCGAAGGCGTCGCCTCGGTC AACGAGGCGGCCATCACCGGCGAGTCCGCGCCTGTCATCCGCGAATCCGGCGGCGACCGCTCGGCGGTGACCGGCGGCAC CCAGGTGCTGTCGGACTGGATCCGCGTGCGCATCACGGCCGCGCAGGGCTCGACCTTCATCGACCGCATGATCAAGCTGG TCGAGGGTGCCGAGCGGCAGAAAACGCCGAACGAGATCGCGCTGAACATCCTGCTCGCCGGCCTCACCATCATCTTCGTG TTCGCGACGGTGACGATCCCGAGCTACGCGGCCTATGCCGGCGGCTCGATCTCGGTGGTCGTGCTGGTGGCGCTGTTCGT GACCCTGATCCCGACCACGATCGGCGCACTGTTGTCGGCGATCGGCATCGCCGGCATGGACCGCCTGGTGCGCTTCAACG TGCTGGCGATGTCCGGCCGCGCCGTCGAGGCCGCCGGCGACGTCGACACCCTGCTGCTCGACAAGACCGGCACCATCACG CTCGGCAACCGCCAGGCCACCGCGTTCCGTCCGGTCCGCGGCGTCAGCGAGCAGGAGCTTGCCGATGCGGCGCAACTCGC CTCGCTCGCCGACGAGACGCCGGAGGGCCGTTCGATCGTCGTGCTGGCCAAGGAGAAATACGGCATCCGCGGCCGTGATA TGGCCGAGCTCGGCGCCACCTTCGTTCCGTTCACGGCGCAGACCCGCATGAGCGGCGTCGATGCCGGCGGCTCTTCGGTG CGCAAGGGCGCGGTCGATGCGATCCTCAATTATATCAGCGGCGGCACGACCCAGGTCGCGTCAGGTAACACGATGCGCGC GATCCAGCCCATGGAAAGCGAGCTGGCCCGTGAGACCAGAGCGATCGCCGATGAGATCGCCAAGTCCGGCGGCACGCCGC TGGCGGTGGCCAAGGACGGCCGGCTGCTCGGCGTCATCCAGCTGAAGGACATCGTCAAGGGCGGCATCCGCGAGCGCTTC GCCGAGCTGCGCCGCATGGGCATCCGCACCATCATGATCACCGGCGACAATCCGATGACCGCGGCTGCGATCGCCGCCGA GGCCGGCGTCGACGATTTCCTGGCTCAGGCGACGCCGGAGGACAAGCTCCGGCTGATCCGCGACGAACAGGCCAAGGGCA AGCTGGTCGCGATGTGCGGCGACGGCACCAACGACGCGCCGGCGCTGGCGCAGGCGGATGTCGGCGTCGCCATGAACACC GGCACGCAGGCGGCGCGCGAGGCCGGCAACATGGTCGACCTCGACTCCAACCCGACCAAGCTGATCGAGGTCGTGGAGAT CGGCAAGCAGCTGCTGATGACGCGCGGTGCACTGACCACGTTCTCGATCGCCAATGACGTCGCCAAGTACTTTGCGATCA TCCCGGCGATGTTCCTGGCGTTCTACCCGCAGCTCAACGTGCTGAACGTCATGAATCTCGCCAGCCCGCAGAGCGCGATC CTCTCGGCGATCATCTTCAACGCGCTGATCATCATCGCGCTGATCCCGCTGGCGCTGAAAGGCGTTGCCTACCGCGCTAT CGGCGCCGGCGCGCTGCTCGGCCGCAACCTGCTGATCTACGGCCTCGGCGGCATCATCATCCCGTTCATCGGCATCAAGG CGATCGACCTGATCGTGACCGCCTTGCATCTGGCTTAA Protein sequence : METVKLQKRSSMSTMLDAKIVLPAIKAAFVKLDPRLMIKNPVMFVVEIVAALTTVIFLRDVVTGGANLGFTFQIILWLWF TVLFANFAEAVAEGRGKAQADSLRKTRTESQAKLLTGTSPADHTYRLVAGTSLKVGDIVLVEAGDTIPSDGEVIEGVASV NEAAITGESAPVIRESGGDRSAVTGGTQVLSDWIRVRITAAQGSTFIDRMIKLVEGAERQKTPNEIALNILLAGLTIIFV FATVTIPSYAAYAGGSISVVVLVALFVTLIPTTIGALLSAIGIAGMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTIT LGNRQATAFRPVRGVSEQELADAAQLASLADETPEGRSIVVLAKEKYGIRGRDMAELGATFVPFTAQTRMSGVDAGGSSV RKGAVDAILNYISGGTTQVASGNTMRAIQPMESELARETRAIADEIAKSGGTPLAVAKDGRLLGVIQLKDIVKGGIRERF AELRRMGIRTIMITGDNPMTAAAIAAEAGVDDFLAQATPEDKLRLIRDEQAKGKLVAMCGDGTNDAPALAQADVGVAMNT GTQAAREAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFLAFYPQLNVLNVMNLASPQSAI LSAIIFNALIIIALIPLALKGVAYRAIGAGALLGRNLLIYGLGGIIIPFIGIKAIDLIVTALHLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 4e-158 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-158 | 60 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-131 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-129 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-129 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-129 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-129 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 8e-130 | 54 |
