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Name : thiC (BBta_6226) Accession : YP_001242055.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 6472979 - 6474880 bp Length : 1902 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACATCCGCTCCAATCCCGACACGACACTGCCCGCCGTGACCACCGGTCCGCTGCCCTCCTCGCGCAAGATCTATGC GGCGCCGGACTCCGCGCCCGATTTGCGCGTGCCGCTGCGCGAGATCATCCTCTCCGAGGCCGCCGGCGAGCCGAACCTGC CGGTGTACGACACGTCGGGCCCCTACACCGATCCCTCCGTCACCATCGACGTCAATGCCGGCCTGCCGCGCAACCGCACG GCCTGGGTGCTCGAACGCGGTGGCGTCGAGGAGTATGAGGGGCGCGACATCAAGCCGGAGGACAACGGCAATGTCGGCGC CGACAAGGCGGCGAAAGCCTTCATCGCGCATCACAAGCCGCTGCGCGGCCTCGACGGTCACAAGATCACCCAGCTCGAAT TCGCCCGCGCCGGCATCATCACCAAGGAGATGATCTACGTCGCCGAGCGCGAGAATCTTGGCCGCAAGCAGCAGCTGGAA CGCGCCGAAGCCGCGCTCGCCGACGGCGAGAGTTTTGGCGCCGAGGTCCCCGCCTTCATCACGCCGGAGTTCGTGCGCTC CGAGATCGCGCGGGGACGGGCCATCATCCCCTGCAACATCAACCACGCCGAATTGGAGCCGATGATCATCGGCCGCAACT TTCTCACCAAGATCAACGCCAATATCGGCAACTCGGCGGTGACCTCGTCCGTCGAGGAGGAAGTGGACAAGATGGTGTGG GCGATCCGCTGGGGCGCCGACACGGTGATGGACCTCTCGACCGGCCGCAACATCCACACCACCCGCGAATGGATCCTGCG CAACTCGCCGGTGCCGATCGGCACGGTGCCGATCTACCAGGCGCTGGAGAAGTGCAACGGCGATCCGGTCAAGCTGACCT GGGAGCTCTACAAGGACACGCTGATCGAGCAGTGCGAACAGGGCGTCGACTACTTCACCATCCATGCCGGCGTGCGGCTG CAATACATCCACCTCACCGCGTCACGCGTCACCGGCATCGTCTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTCGC GCATCACAAGGAGAGCTTCCTCTACACGCATTTCGACGAGATCTGCGACATCATGCGCAAGTATGACGTCTCGTTCTCGC TCGGCGACGGCCTGCGCCCCGGCTCGATCGCGGACGCTAACGACCGCGCGCAGTTCGCGGAGCTGGAGACGCTCGGCGAG CTCACCAAGATCGCCTGGGACAAGGGCTGCCAGGTCATGATCGAGGGCCCCGGCCACGTGCCGATGCACAAGATCAAGAT CAACATGGACAAGCAGCTCAAGGAGTGCGGCGAGGCGCCGTTCTATACGCTCGGGCCGCTGACGACGGACATCGCACCCG GCTACGACCACATCACGTCAGGCATCGGCGCCGCCATGATCGGCTGGTTCGGCTGCGCGATGCTGTGCTACGTGACGCCG AAGGAGCATCTCGGTCTGCCCGATCGCAACGACGTCAAGACCGGCGTCATCACCTACAAGATCGCCGCCCACGCCGCCGA TCTCGCCAAGGGCCATCCCGCCGCGCAGCTGCGCGACGATGCGCTGTCCCGCGCCCGCTTCGAGTTCCGCTGGACCGACC AGTTCAACCTCGGTCTCGACCCGGACACGGCCAAGAGCTTCCACGACGAGACCCTGCCCAAGGAAGCCCACAAGGTCGCG CATTTCTGCTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACCCAGGACGTCCGCGACTACGCCGCCACGCTGAA CGATCCGACCACCGTCGGCGTGACCATCAGCGGCACCATCGAAGACGGCATGGCCCAGATGAGCGCCAAGTTCAAGGAAA TGGGCGGCAGCGTGTATCTCGATGCTGACAAAGTGAAGGAGAGCAACAAGGCGTTGTCCTGA Protein sequence : MNIRSNPDTTLPAVTTGPLPSSRKIYAAPDSAPDLRVPLREIILSEAAGEPNLPVYDTSGPYTDPSVTIDVNAGLPRNRT AWVLERGGVEEYEGRDIKPEDNGNVGADKAAKAFIAHHKPLRGLDGHKITQLEFARAGIITKEMIYVAERENLGRKQQLE RAEAALADGESFGAEVPAFITPEFVRSEIARGRAIIPCNINHAELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVW AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCNGDPVKLTWELYKDTLIEQCEQGVDYFTIHAGVRL QYIHLTASRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDEICDIMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGE LTKIAWDKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP KEHLGLPDRNDVKTGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWTDQFNLGLDPDTAKSFHDETLPKEAHKVA HFCSMCGPKFCSMKITQDVRDYAATLNDPTTVGVTISGTIEDGMAQMSAKFKEMGGSVYLDADKVKESNKALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 66 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 66 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 64 |
