Gene Information

Name : BBta_6069 (BBta_6069)
Accession : YP_001241902.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : glycine betaine/carnitine/choline ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : 3.6.3.-
Position : 6292060 - 6292935 bp
Length : 876 bp
Strand : +
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic

DNA sequence :
GTGCTAGGTCCGATCGGGCGGGCCCTTGCCCTCCCCTGGGAGGGGGAGCAGCGCGCGAGCTTCGAGATCGCCAAAGGCCG
CATGCAGCCCACGCCCCTGATCAGCTACGATCGCGTCCACAAGACCTTTGCCGGCCCGGCAGGCGCGGTGGCTGCGGTCG
ACGACGTCTCGCTGGACATCGCCGAGGGCGAGTTCCTGGCGATCGTCGGCAGCTCCGGCTCGGGCAAGACGACGCTGCTG
CGGCTCGCCAACCGGCTGATCGAGCCGGATGGCGGCAGCATCCGCATCGCTGGCGAGGACATCAGCTGCCTCGAACCGGT
CGCCCTGCGCCGGCGCATCGGCACCGTGTTCCAGAACGGCGCGCTGTTTCCGCACATGACGGTTGCGGCCAATATCGGCA
TCACGCCCCGGCTGCTGGGGACAGCGCCCAAGGCGGTCGCCGCCCGCGTCGACGAACTGCTCGACCTCGTCCAGCTCGAC
CGCGCCGCCCATCGCAACCGCCTGCCGGATGCGCTCTCCGGCGGTCAGCGCCAGCGCGTCGGCGTGGCGCGCGCGCTGGC
CGCGGGTCCCCGCATCGTGCTGATGGACGAGCCGTTCGGCGCGCTCGATCCGCTGACCCGCGACACGCTCGGCAGCGACT
ACCGCGCCCTGCATGCGCAGCTCGGGCTGACGACGGTGATGATCACCCATGACATCACCGAGGCGCTGCTGCTCGCCGAC
CGCATCGCGGTGATGCGCAGCGGGCACCTGGTCGAGGCCGGCACGCCAGCCGCGCTCGCCGCCAGCCGCGAGCCTTACGT
GGCGGAGCTGATGACCACGCCGCGCCGCCAGGCCGCACGCCTCGCCGCGCTGCTGCCCGAGAGCGGCGCGGCATGA

Protein sequence :
MLGPIGRALALPWEGEQRASFEIAKGRMQPTPLISYDRVHKTFAGPAGAVAAVDDVSLDIAEGEFLAIVGSSGSGKTTLL
RLANRLIEPDGGSIRIAGEDISCLEPVALRRRIGTVFQNGALFPHMTVAANIGITPRLLGTAPKAVAARVDELLDLVQLD
RAAHRNRLPDALSGGQRQRVGVARALAAGPRIVLMDEPFGALDPLTRDTLGSDYRALHAQLGLTTVMITHDITEALLLAD
RIAVMRSGHLVEAGTPAALAASREPYVAELMTTPRRQAARLAALLPESGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-37 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-38 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-21 41