Gene Information

Name : BBta_5622 (BBta_5622)
Accession : YP_001241486.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : 1.1.1.132
Position : 5857453 - 5858736 bp
Length : 1284 bp
Strand : -
Note : Capsular polysaccharide biosynthesis protein; Evidence: Function of strongly homologous gene

DNA sequence :
ATGTCTCATGGCCGGAAGATCGCGGTGATAGGCCTTGGTTACGTCGGCCTGCCGGTTGCCGCAGCGTTTGCACGCGCAGG
CGGCCCCGTCCTTGGGTTTGACATCGATGCCAAGCGGGTCGCCGAACTGAGGGATGGGCAGGACCGGACCTGTGAGGTCG
ATGCCGCCGATCTCCGCCATCCCGGGCTGCGCTTCACCAGCGACCCGGCAGATCTCGGCTCTGCCGATTTTTTCATCGTC
ACGGTTCCGACCCCGATCGACAGCGCGCGGCGGCCGGATCTCGGCGCCATGCTCGCCGCCACCCGAAGCGTGGCCGCCGT
GCTGAAGCGGGGCGACATCGTGGTCTATGAATCGACCGTCTATCCAGGTGCCGTCGAGGAAGACTGCGTGCCGCTGCTGG
AAAGCGGCTCGGCGCTCAAGGCCGGGACCGATTTCAATGTCGGCTATTCGCCGGAGCGCATCAATCCTGGTGACAAGACC
CATCGCTTCGAGACGATCACCAAGGTGGTGTCGGCGCAGAACCCGCACACCCTGCAAATTGTCGCGGAGGTCTACGGATC
GGTCGTCATCGCCGGGATTCATCGCGCCCCCTCGATCAAGGTGGCGGAGGCGGCCAAGGTCATCGAGAACACGCAGCGCG
ATCTCAACATCGCCTTCATGAACGAACTGTCGCTGATCTTCCAGGCATTGGAGATCGATACCGGCGACGTCCTCGCGGCG
GCCGGCACCAAATGGAACTTCTTGCCGTTCTCGCCCGGACTGGTGGGCGGGCACTGCATCGGTGTCGATCCCTATTACCT
GACGTATCGCGCCGAAAAGGCCGGGTATCATCCCGAAGTCATCCTCGCCGGACGTCGCATCAACGATGAGATGGGCCGTC
GCATCGCGCGGGAATGTATCCGTGGGCTGCTGAAGCGCAGAGGGCGAAGCGGCGTCGTCACCATTCTCGGCATGACGTTC
AAGGAGAACGTGCCGGACATCCGCAATTCGCGTGTGATCGACATTGTCCGCGAACTGCAGTCGTTCGGTGTCGAGGTGCA
GGTCGCCGACCCTCTCGCCGATGCAGCGGCGGTGCATGAGGAATACGGCATCGACCTCACCGCGTTCGCGGCGCTGCGCC
CGGCCGATGCGGTCGTGCTCGCGGTGTCCCACGATCAGTTTCTGGCTGGCGGCTGGTCGTTGGTTCAGGCTCTCCTGCGC
GAAGGCCATGGCCTTGTGCTCGACGTCAAGATGAAGCTCGACCGCGCGAGCAAACCCGGCGCCATCGAGCTGTGGCGGCC
CTGA

Protein sequence :
MSHGRKIAVIGLGYVGLPVAAAFARAGGPVLGFDIDAKRVAELRDGQDRTCEVDAADLRHPGLRFTSDPADLGSADFFIV
TVPTPIDSARRPDLGAMLAATRSVAAVLKRGDIVVYESTVYPGAVEEDCVPLLESGSALKAGTDFNVGYSPERINPGDKT
HRFETITKVVSAQNPHTLQIVAEVYGSVVIAGIHRAPSIKVAEAAKVIENTQRDLNIAFMNELSLIFQALEIDTGDVLAA
AGTKWNFLPFSPGLVGGHCIGVDPYYLTYRAEKAGYHPEVILAGRRINDEMGRRIARECIRGLLKRRGRSGVVTILGMTF
KENVPDIRNSRVIDIVRELQSFGVEVQVADPLADAAAVHEEYGIDLTAFAALRPADAVVLAVSHDQFLAGGWSLVQALLR
EGHGLVLDVKMKLDRASKPGAIELWRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-111 55
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-98 52
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-98 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_5622 YP_001241486.1 UDP-glucose/GDP-mannose dehydrogenase family protein VFG0431 Protein 3e-98 52