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Name : fliP (BBta_5499) Accession : YP_001241367.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 5715201 - 5715905 bp Length : 705 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGGCCGCCGGCGCACTGGCGGGGAGCGCGGCTGCGCAGGACATCAGCATCAATCTTGGGCCGGGCAATGGCGGCGTGAC TGAACGCGCGGTCCAGCTGATCGCGCTGCTCACGGTGCTGTCGATCGCACCGTCGATCCTGATCATGATGACGTCGTTCA CGCGCATCGTCGTGGTGCTATCGCTGCTGCGCACCGCGATGGGGACCGCGACGGCGCCGCCGAACGCGGTGATCATCGCG CTTGCGATGTTCCTGACCGCCTTCGTCATGGGACCGGTGCTGCAGAAATCCTATGACGACGGCGTCCGGCCGCTGATCGA GAACCAGATCGGCGTCGAGGACGCGCTGCAGCGCGCCTCGGTGCCGCTGCGCGGCTTCATGCAGAAGAACGTGCGCGAGA AGGACCTCAAGCTGTTCATGGATCTCTCGGGCGAGGCGCCGCCGGCGACGCCCGACGAGCTGTCGCTGCGCATCCTGGTG CCCGCCTTCATGATCTCGGAGCTCAAACGCGCCTTCGAGATCGGCTTCCTGTTATTCCTGCCGTTCCTGATCATCGACCT CGTGGTCGCCTCCGTGCTGATGTCGATGGGCATGATGATGCTGCCGCCGGTGGTGGTGTCACTGCCGTTCAAGCTGATCT TCTTCGTGCTGGTGGACGGCTGGTCGCTGGTGGCCGGGAGCCTGGTGCAGAGCTACGGCGGGTAG Protein sequence : MAAGALAGSAAAQDISINLGPGNGGVTERAVQLIALLTVLSIAPSILIMMTSFTRIVVVLSLLRTAMGTATAPPNAVIIA LAMFLTAFVMGPVLQKSYDDGVRPLIENQIGVEDALQRASVPLRGFMQKNVREKDLKLFMDLSGEAPPATPDELSLRILV PAFMISELKRAFEIGFLLFLPFLIIDLVVASVLMSMGMMMLPPVVVSLPFKLIFFVLVDGWSLVAGSLVQSYGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-27 | 47 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 1e-26 | 44 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-26 | 42 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-26 | 42 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 1e-26 | 42 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 5e-26 | 41 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 5e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001241367.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 2e-52 | 57 |
| fliP | YP_001241367.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 8e-48 | 56 |
| fliP | YP_001241367.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 5e-47 | 51 |
| fliP | YP_001241367.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 2e-42 | 49 |
| fliP | YP_001241367.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 6e-30 | 44 |
| fliP | YP_001241367.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 2e-27 | 43 |
| fliP | YP_001241367.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 7e-27 | 42 |
| fliP | YP_001241367.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 1e-26 | 42 |
