Gene Information

Name : BBta_5377 (BBta_5377)
Accession : YP_001241258.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5602692 - 5603453 bp
Length : 762 bp
Strand : -
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic

DNA sequence : 
ATGAGTCCCTCGATCATCAACGACATGAACGCTGCCGCGCGCTTCGAGGGGCCGGGCGTCTCGCCGGTGTTTCGCGCCCG
CAAGCTCTCCAAGACCTACCGCATGGGCGAGGTCGAGGTGCATGCGTTGCGCGACGTTGATCTCGACATCATCGAGGGCG
AATTCGTGGTGCTGCTCGGGCCCTCTGGTTCAGGCAAGTCGACGCTGCTGAACATCCTCGGTGGGCTCGACAGTCCGACG
TCGGGCGACGCGCAATGGCGGGATCATCAGCTGGTCGGCGCCGGCGATGCCGAGCTGACGCGCTACCGGCGCGAGCATGT
CGGCTTCGTGTTCCAGTTCTACAACCTGATCCCCAGCCTGACCGTGCTCGAAAATGTCCAGCTGGTCACCGAGATCGCCG
ACAGGCCGCTCGATCCGCTGGAGGTGTTGAAGCTCGTCGGCCTCGAGCGGCGGATCGACCATTTTCCTTCGCAACTGTCC
GGCGGCGAGCAGCAACGGGTCGCGGTAGCCCGCGCCATCGTGAAGTCGCCTGACGTGCTGCTGTGTGACGAGCCGACCGG
TGCGCTCGACTACGAGACCGGCAAAGTGGTGCTGGCCGCGATCGCGCGCGCCAACGAGCAACTCGGCACCACCACCATCG
TCATCACCCACAATGCGGCGATCGCCGGGATGGCCGACCGCGTGCTGCGGCTCGGCGGCGGCCGCATCGTCGGCGAGACG
CGCAATCCGCGGCGGCTCTCGGCCGAGGAGGTGACGTGGTGA

Protein sequence : 
MSPSIINDMNAAARFEGPGVSPVFRARKLSKTYRMGEVEVHALRDVDLDIIEGEFVVLLGPSGSGKSTLLNILGGLDSPT
SGDAQWRDHQLVGAGDAELTRYRREHVGFVFQFYNLIPSLTVLENVQLVTEIADRPLDPLEVLKLVGLERRIDHFPSQLS
GGEQQRVAVARAIVKSPDVLLCDEPTGALDYETGKVVLAAIARANEQLGTTTIVITHNAAIAGMADRVLRLGGGRIVGET
RNPRRLSAEEVTW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_5377 YP_001241258.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-49 53
BBta_5377 YP_001241258.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-31 46
BBta_5377 YP_001241258.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-33 44
BBta_5377 YP_001241258.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-36 43
BBta_5377 YP_001241258.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-37 43