|
Name : BBta_5258 (BBta_5258) Accession : YP_001241151.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : 3.6.3.- Position : 5484179 - 5485825 bp Length : 1647 bp Strand : + Note : dipeptide/oligopeptide/nickel transporter; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic DNA sequence : ATGACCGACACCATCCTCGACATCGACAATCTCGTCGTCACCGTCGGCAAGACGAAGAACCCGAACGGGCCGCGCATCAT CGACGGCGTGTCGATCAAGGTCGCCAAGGGCGAGACGCTGTGCGTCGTCGGCGAGAGCGGCTCGGGCAAGTCCGTGACCT CGCTGACCACGATGGGCCTGTTGCCGAAGAACGCGCTGCATGCCGTCGGCGGCAGCGTCAAGCTGGTCGGCGAGGAACTG CTCACCGCCAGCGATCGCCGGCTGCGCGAACTGCGCGCCACACGGATGGCGATGATCTTCCAGGAGCCGATGACCGCGCT CAATCCGGTCGTTCCGGTCGGCCGCCAGATCGACGAGGTGTTGCGCGCGCATACGTCCCTCGACGCAAGGGCGCGCCGCA AGCGCATCCTCGACATGATGGAGCAGGTCCACCTGCCCGACGTCGAGCGCATCTTCGCCTCCTACCCACACCGCCTGTCC GGCGGCCAGCGCCAGCGCATCATGATCGCGATGGCTTTGGTGCTGGAGCCGAAGCTCCTGATCGCCGACGAGCCGACGAC TGCCCTCGACGTCACCACGCAGAAGCAGATCCTCTCGCTGATCCGCGAACTGCAGCGCGATCACGGCACGGCGGTGTTGT TCATCACCCACGACATGGGCGTCGTCGCCGAGATCGCCGATCGCGTATCCGTCATGCGCCAGGGCCGCCTGGTCGAGACC GGCCCGCTCGACAAGATCCTGCGCAGCCCGGAAATGGACTACACGCGCAACCTGCTCGCCGCGGTGCCGAGCCTGATCCC GCGGCCGCCGCGGCCCGAGACCAGCGAGCCGGTGGTGTTGGAGACCAACGAGCTCGGCAAGGTCTATCGCGAGCGCTCGT TCATCGGCAAAGCGCGCGAGGTCGTCGCCGCGCAGAACGTCACCCTCACCTTGCGCAAGGGCCGCACGCTCGGCATCGTC GGCGAGAGCGGCTCCGGCAAGTCGACGGTGGCGCGCTGCATCGTGCGCCTGATCGATCCGACTTCGGGCGGCGTCCGTCT GGCGGGCAACGAGATCTCGATCCTGACGCGCCGGCTGCTGCAGCCGCACCGCAAGCGCATCCAGATCGTGTTCCAGGATC CCTACCGCTCGCTCAACCCGCGGCTGACGGTCGGCGAGAGCATCGCCGAGGGCCCGGTCAATTACGGCACCTCGCACGAT AAGGCGATGGCGCGGGCGCGCGAGCTACTCGAGCTGGTCGGCCTGCCCGCGGACGCGATCTCGCGCTACCCGCACCAGTT CTCCGGCGGCCAGCGCCAGCGCATCGCGATCGCGCGCGCGCTCGCGCTCGATCCGGACGTGCTGGTGGCCGACGAAGCGG TCTCCGCGCTCGACGTCTCGGTGCAGGCCCAGGTGCTGGAGCTGCTCGACGAGATCCAGCGCCGGCTCGGGATCGCGATC CTGTTCATCACCCACGATCTGCGTGTCGCCGCCCAGATCTGCGATGACGTCGTGGTGATGCAGAAGGGCCGCATCGTCGA ACAGGGTCCGGCCGGCGAGATCCTGACCCATCCGAAGGAAGCCTACACCAGGTCCCTGCTCGAAGCCGCACCCGGCCGCC ACTGGGATTTCGCCAACTTCCGCCCGGTGTCGGAGGCCGTGGCGTAA Protein sequence : MTDTILDIDNLVVTVGKTKNPNGPRIIDGVSIKVAKGETLCVVGESGSGKSVTSLTTMGLLPKNALHAVGGSVKLVGEEL LTASDRRLRELRATRMAMIFQEPMTALNPVVPVGRQIDEVLRAHTSLDARARRKRILDMMEQVHLPDVERIFASYPHRLS GGQRQRIMIAMALVLEPKLLIADEPTTALDVTTQKQILSLIRELQRDHGTAVLFITHDMGVVAEIADRVSVMRQGRLVET GPLDKILRSPEMDYTRNLLAAVPSLIPRPPRPETSEPVVLETNELGKVYRERSFIGKAREVVAAQNVTLTLRKGRTLGIV GESGSGKSTVARCIVRLIDPTSGGVRLAGNEISILTRRLLQPHRKRIQIVFQDPYRSLNPRLTVGESIAEGPVNYGTSHD KAMARARELLELVGLPADAISRYPHQFSGGQRQRIAIARALALDPDVLVADEAVSALDVSVQAQVLELLDEIQRRLGIAI LFITHDLRVAAQICDDVVVMQKGRIVEQGPAGEILTHPKEAYTRSLLEAAPGRHWDFANFRPVSEAVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-96 | 45 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-80 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-80 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-80 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-80 | 44 |
