Gene Information

Name : BBta_5200 (BBta_5200)
Accession : YP_001241098.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5427570 - 5428286 bp
Length : 717 bp
Strand : -
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
GTGATAGAGCGGCCTATACTTGCCGTCTTCGGCGTCTCGAAGACCTATCCGAGCAGGCATGGTGCGCTGCCGGTTCTTCA
GGACGTCTCTCTGGTGGTCTGCCGATCTGAATTGTGCGCGATCAAGGGGGCGTCCGGCTCCGGCAAGAGCACCTTGATGA
GCCTGATCGGGTTGCTGGATCGACCGGACGCGGGTCGGATCGAAATTACCGGCCTCAGGGTGGACCGCCTCGGTGCGGAC
GAGCAGGCCAGGCTGCGCAATCGGCTGATTGGCTTCGTCTTCCAATCGTTCAATTTGCTCCCGGGGCTTTCGGCGCTTGA
AAATGTCGCGCTCCCCCTGCTGTACCGCGGCGTGTCACGACCTGCGCGCCGGGACATTGCGAGATCCGCTCTGGCGCGGG
TGGGTCTCCAAGACCGGATCGACCACCGCCCGAACCAGATGTCTGGAGGGCAGTGCCAGCGCGTCGCCATCGCGCGCGCG
TTGGCAGGGCAACCGGCCGTCATTTTGGCCGATGAGCCGACCGGGAGCCTCGATACAGCGACATCCGAGAGCATCATGAA
TCTGTTTCTCGATCTCAACAGGAATCACGGGACCACGATCATTCTGGTGACGCACGATCCGACGGTGGCCGCGCGCTGTC
CGCGTCGAATCGTCGTGAGTGACGGTCGCGTCGTCGACGACAATCGCGATGAGCTGCGCGATGCAGGACCCTGTTGA

Protein sequence :
MIERPILAVFGVSKTYPSRHGALPVLQDVSLVVCRSELCAIKGASGSGKSTLMSLIGLLDRPDAGRIEITGLRVDRLGAD
EQARLRNRLIGFVFQSFNLLPGLSALENVALPLLYRGVSRPARRDIARSALARVGLQDRIDHRPNQMSGGQCQRVAIARA
LAGQPAVILADEPTGSLDTATSESIMNLFLDLNRNHGTTIILVTHDPTVAARCPRRIVVSDGRVVDDNRDELRDAGPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_5200 YP_001241098.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-40 50
BBta_5200 YP_001241098.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-49 49
BBta_5200 YP_001241098.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-36 43