Gene Information

Name : oxa5 (BBta_5028)
Accession : YP_001240937.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Resistance
Product : beta-lactamase (OXA-5), class D
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2602
EC number : 3.5.2.6
Position : 5256875 - 5257693 bp
Length : 819 bp
Strand : -
Note : Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic

DNA sequence :
ATGCCCCTGATCAGCCGCCGCCATGCGCTCGCTTTGATGGCCGGCGCCAGCCTGGTGCCGGCGCGCGCATCCGCCCATGT
CGCGCCGCCCCGCAACGAGATCCGCGCCGGGCTCGCTCAACGCTTCACCGACATGGGCACCCAGGGCACGTTCTTCGCTT
ATAAGGTCGAGGAGTATCTGATCATTGCCAGCGACACCGAGCGCTCGGGCGCGGCGAAGCTGCCGGCCTCGACCTTCAAG
ATCGCGAACGCGCTGATCGCGCTGGAGACCGGCGTCGTCGCCGATCCCGACACCGACATGTTCAAATGGGACGGCGTCAC
GCGATCGATCGAGGCCTGGAACAAGGATCATACGCTGCGCAGCGCGATCGCGGTGTCGGCGGTGCCGGTGTTTCAGGAGA
TCGCGCGGCGCATCGGCCCCGAGCGGATGCAGAAATATCTCGAGGAGCTCGATTACGGCAATCACGACATCGGCGGCGGC
ATCGATCAGTTCTGGCTGACCGGCGCGCTTCGCATCGATCCGGTGGAGCAGGTCGACTTCATCGACCGACTCAGGCGTGG
TGCGCTGCCGGTCTCCAAGCGCAGCCAGGATCTGACGCGCGATATCATCCCCGTGACCAAGGTCGGTGATGCCGTCATCC
ACGCCAAGTCCGGCCTGCTCGGCAAGGAGCAGGGCTCGCTCGGTTGGATGGTCGGCTGGGTCGAGAAGGGTGACCAGCCG
ACCGTGTTTGCGCTCAACATGGATTGCCCCGAGCCACGCCATGTCAAAGCGCGGATGACGCTGACCCAGGCCTGCCTGAA
GGATATCGGCGCATTGTGA

Protein sequence :
MPLISRRHALALMAGASLVPARASAHVAPPRNEIRAGLAQRFTDMGTQGTFFAYKVEEYLIIASDTERSGAAKLPASTFK
IANALIALETGVVADPDTDMFKWDGVTRSIEAWNKDHTLRSAIAVSAVPVFQEIARRIGPERMQKYLEELDYGNHDIGGG
IDQFWLTGALRIDPVEQVDFIDRLRRGALPVSKRSQDLTRDIIPVTKVGDAVIHAKSGLLGKEQGSLGWMVGWVEKGDQP
TVFALNMDCPEPRHVKARMTLTQACLKDIGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaOXA-129 AET25386.1 OXA-129 beta-lactamase Not tested PAGI-2(C) Protein 4e-45 45
bla OXA-129 AFG30109.1 OXA-129 beta-lactamase Not tested PAGI-2 Protein 4e-45 45
bla OXA-10 CAJ77047.1 Oxacillinase Not tested AbaR1 Protein 1e-42 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D AM932669.1.gene2.p01 Protein 2e-45 45
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D X75562.1.gene1.p01 Protein 4e-43 44
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D X58272.1.gene1.p01 Protein 1e-44 44
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D NC_010410.6002874.p0 Protein 6e-43 43
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D U37105.2.gene2.p01 Protein 6e-43 43
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D AM412777.1.gene1.p01 Protein 4e-43 42
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D Z22590.1.gene1.p01 Protein 3e-42 42
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D AY445080.1.gene1.p01 Protein 3e-43 42
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D AJ854182.1.gene1.p01 Protein 2e-42 42
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D AF231133.1.gene3.p01 Protein 2e-40 42
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D U59183.1.gene3.p01 Protein 4e-43 42
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D HQ700343.1.gene1.p01 Protein 4e-41 41
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D JN205800.1.gene6.p01 Protein 3e-42 41
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D AY500137.1.gene1.p01 Protein 2e-42 41
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D HM015773.1.gene6.p01 Protein 1e-42 41
oxa5 YP_001240937.1 beta-lactamase (OXA-5), class D AY343493.1.gene1.p01 Protein 3e-40 41